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SCN18_30_10_14_R5_P_scaffold_2208_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(2..610)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI00036524BC similarity UNIREF
DB: UNIREF100
  • Identity: 35.1
  • Coverage: 168.0
  • Bit_score: 112
  • Evalue 2.70e-22
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 132.0
  • Bit_score: 108
  • Evalue 1.50e-21
Regulatory protein GntR HTH {ECO:0000313|EMBL:ABY33018.1}; TaxID=419610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain PA1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.6
  • Coverage: 173.0
  • Bit_score: 108
  • Evalue 7.20e-21

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGCCCGCCAAGAAAATAGACGACGTCCACGGTGGTGCTGCCAGCCTGTCTTCTTCCGTCGGCGGGCGCTCAATGAAGCTGGATCAGGGCATGGGTAGTGCCACTCTGTCGGCGCAGCTCTACGAGAAGGTGCGCGATCTCATCTATCTGGGCGTTCTGCCGCCCGGAACACAGGTCACCGAGCAGGGCCTGTCACGGCAGTTCGGTGTCTCGCGCACACCCATGCGCGAAGCGCTCAGAATGCTGGAATCGCGAGGGTTCGTGGAGATAACGCCCAACAAGGGCGCGCGTGTCGGCGTTGTCGACAACGAGGAATATCACACCGGCATGGCCATCGTTTCAGTCGTGGACGAAATCCTCGCCGAACGCATTTGTCGGCTCGTCACCGACGATGACATTGCGGAACTCGAAGTCCTCGAAATGCTGATGACCAAGGCCTTCGAAAACCGCGACAAGGAAAAATACCTGCGGGTGAATTTCCAGATCCACGAACGCCTCGAAGCCATCGGCGACAGCTTCTTCTTGCAGTCGATCCGCTCGTTCATCTCGGCGCGGCTCGCCTCGAAGAGCCATGTCCTTCTCGGCGATCCGGCAACCTGGAAACGCTTT
PROTEIN sequence
Length: 203
MPAKKIDDVHGGAASLSSSVGGRSMKLDQGMGSATLSAQLYEKVRDLIYLGVLPPGTQVTEQGLSRQFGVSRTPMREALRMLESRGFVEITPNKGARVGVVDNEEYHTGMAIVSVVDEILAERICRLVTDDDIAELEVLEMLMTKAFENRDKEKYLRVNFQIHERLEAIGDSFFLQSIRSFISARLASKSHVLLGDPATWKRF