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SCN18_30_10_14_R5_P_scaffold_2215_5

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 3426..5129

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T8H2_MESCW similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 567.0
  • Bit_score: 995
  • Evalue 2.20e-287
ABC transporter permease {ECO:0000313|EMBL:EZQ12851.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 567.0
  • Bit_score: 1003
  • Evalue 1.10e-289
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 88.9
  • Coverage: 567.0
  • Bit_score: 995
  • Evalue 6.20e-288

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1704
ATGACCGCAAGGGTGAAGGAAAGTCGGGGCCAGGAAATGGCCCTGACGGCGGCTGTAGCCGTTGTCATCGTGCTTCTGTCGCTGCTGCCGATGCTGCGCCTCTTGAAGGAGGTCGTGGCGCCGGGTGGTGTCGTCTCCGACACTGCGATCCGCCTTGGCCTGTCCAGTTCGGCGACGTGGGTGGCGACATGGCATACGCTGGTTGTCGGCATCTTCGGCACGCTGCTTGCTGTCGTGCTCGGCACGTTCGTCGCGCTTCTGGTCACGCTCACCGACATTCGCGGGCGCGGCGTGCTTGTCTTGTGTTACGTCATGCCGCTGATGATTGCGCCGCAGGTGACGGCGCTTGCCTGGCTGCAATTGTTTGGCCCGGCCAGCCCTTTCCTCAAGCTGCTCGGCCTTGCGCCGCCGCTTGGCACCCGCAATCCGCTGTATTCCACCGAAGGCATTATCCTGCTGCTCGGCGTTCAATACGGGCCGCTGGTCTTCCTTCTCGTGCGTGCCGGTCTACGCAAGCTGCCGCGTGAACTGGTCGAAGCCGCACGAGCAGGCGGCGCAGGCTGGTTCACAGTGCTGCGCACAGTGGTGCTGCCGCTCATGACGCCCTCTATAATGGCGGCAGCAGCACTGGCCTTCGTTTCCTGCGTCGGAAATTTCGGCATTCCCGCCTTCCTCGGTATTCCCGCGAACTATCTCGTGCTGCCAACGCTCATCTACCAGAAGCTGGCGGGCGGCGGTCCGGCGGTGCTGGGCGAGACGGCGTTCCTGTCGGTGCTGATCGGCATCATCGCCATGGCCGGCATCGTCACCCAGGAAATCATGAGCCGCCGGCGCGACTATCGCATTTCTTCGACGTCGCTGCCCGCTGAGCCCTATGAACTCGGACGCTGGCGCTTACCCGTCGAAGCTGGCATCTGGCTGTTGATCGTATTGATCCTTGTCCTGCCGCTTTTTGGACTTGTGCTGACCTCGCTGGTACCGGGCTACGGCATTGCCCTTTCGTCAGCCACCGCGACCCTCGACAACTATCGCTTCGTCCTGTTCGAGCATGCCGGATCGAGACGCGCATTCTTCAACAGCTTTGCTCTCTCCATCGCCGCTGCGGTGTTCGCAGTGCTCGTCGCAGTGCCAGTCGGCTACCTGATCGCATGGGGCAAGCAAAGGTGGGTCAGGCTGGTCAACCTGTTGATCGAATTGCCTTATGCGCTGCCAGGCGTGGTGCTTGCCATCGCGGCGCTTTTGATGTTCCTGCGGCCGATCCCGTTCACCGGCATCCAGCTCTACAACACCATCTGGATCATCCTCTACGCCTATCTTGCCCGTTTTCTTGTGCTGGCGCTGAGGCCCACCGTCAGCGGCTACCACCAGATCGACCGGGCGCTCGAGGAAGCGGCACAGGTTGCCGGGGCAGGGCTGTTCACGCGCCTGCGCACCATCGTGTTTCCGCTGGTGGCGCCTGCCGCGATCGCCGGCGGGCTGCTCATCTTCATGACTGCGCTCAGCGAACTCACCGTCTCGGCGCTGTTGTGGTCTTCCGGGTCTGAAACCATCGGTGTCGTCATGTTCTCTTTCGAGCAGGGCGGCGATTCCAACTACGCGGCGGCAATGTCGGCCATCACGGTCGCGATCACCTTCGTCCTGATGCTGGTGACCAATCTGCTTGCCCCTTACCTTCCAAGTGGAGTGCTGCCATGGCGGGACTGA
PROTEIN sequence
Length: 568
MTARVKESRGQEMALTAAVAVVIVLLSLLPMLRLLKEVVAPGGVVSDTAIRLGLSSSATWVATWHTLVVGIFGTLLAVVLGTFVALLVTLTDIRGRGVLVLCYVMPLMIAPQVTALAWLQLFGPASPFLKLLGLAPPLGTRNPLYSTEGIILLLGVQYGPLVFLLVRAGLRKLPRELVEAARAGGAGWFTVLRTVVLPLMTPSIMAAAALAFVSCVGNFGIPAFLGIPANYLVLPTLIYQKLAGGGPAVLGETAFLSVLIGIIAMAGIVTQEIMSRRRDYRISSTSLPAEPYELGRWRLPVEAGIWLLIVLILVLPLFGLVLTSLVPGYGIALSSATATLDNYRFVLFEHAGSRRAFFNSFALSIAAAVFAVLVAVPVGYLIAWGKQRWVRLVNLLIELPYALPGVVLAIAALLMFLRPIPFTGIQLYNTIWIILYAYLARFLVLALRPTVSGYHQIDRALEEAAQVAGAGLFTRLRTIVFPLVAPAAIAGGLLIFMTALSELTVSALLWSSGSETIGVVMFSFEQGGDSNYAAAMSAITVAITFVLMLVTNLLAPYLPSGVLPWRD*