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SCN18_30_10_14_R5_P_scaffold_3893_4

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(2759..3610)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B0X3_PARDP similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 278.0
  • Bit_score: 377
  • Evalue 8.30e-102
Uncharacterized protein {ECO:0000313|EMBL:CDX62653.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 278.0
  • Bit_score: 417
  • Evalue 1.00e-113
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 278.0
  • Bit_score: 377
  • Evalue 2.30e-102

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 852
ATGCTCGATCAACGCCTTCTCCGCGCCTTCGTGGCAATCGCCGATGCGCGTAGCTTTACGCTCGCGGCAGAGCGCCTGAACATGACGCAGTCCACCATCAGCCAGCAGCTTGCCCGACTGGAGGAAGCAGTCGGGGCGGCACTGATCGACCGCGCGGCGCGGCCCGTCGAGCCGACGACTACAGGCGAGCGGTTGCTGGGCTATGCCCGCAGGATCCTCGCCCTTCAGGAAGAGGCGGAAGCAGCGCTTGGCGACCCGGCCGGCACGACATCGATCAGGATCGGCGTTCCAGAAGATATCGTCACAAGCGCCATGGCGGCGGTGTTCAGCGACTTCGCCCGGCGACATCGCACGATCAGGCTGGACGTGACCGCCGGGCTGAGCCGCGACCTGACCCGCCGCTACCGCGCCGGTGAATTCGACATTGTTATCGTCAAGGAACCATCCGCCGACCCATCCTGCCGGGCGACCTATCCGGAAGCCATGGCTTGGTTCGAGAGCGCCGATGGATCAGGCGAGTGGCTCAACCCGATACCGCTGGTTACTTTCCCGCCCGGCGGCCTCTATCGCGAAGCGATGTTCCAGCGCATCGAGCAGGAGCAACGCCGCTGGTATATCGCCTTTTCGGGCAGCAGCCTGCATAGCGTGCTGGTGGCCGTCGAGGGAGGAATAGGCCTCTCTCTACTGCCCAAGAGTGCCGTTGCCGGATATCGCGTGAGGCAATGCATGGCGTTCGGCGCGGAACCTGAGATGGCCGTCTCGATCTATTCATGGGAAAGCGCGGGACCGGGCGCTGAGTTGCTGGAGCAGATGAGTGCCGTTCTTGCTGCCAGAGGGGCCGCCCATGGATAG
PROTEIN sequence
Length: 284
MLDQRLLRAFVAIADARSFTLAAERLNMTQSTISQQLARLEEAVGAALIDRAARPVEPTTTGERLLGYARRILALQEEAEAALGDPAGTTSIRIGVPEDIVTSAMAAVFSDFARRHRTIRLDVTAGLSRDLTRRYRAGEFDIVIVKEPSADPSCRATYPEAMAWFESADGSGEWLNPIPLVTFPPGGLYREAMFQRIEQEQRRWYIAFSGSSLHSVLVAVEGGIGLSLLPKSAVAGYRVRQCMAFGAEPEMAVSIYSWESAGPGAELLEQMSAVLAARGAAHG*