ggKbase home page

SCN18_30_10_14_R5_P_scaffold_3971_5

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 3391..3861

Top 3 Functional Annotations

Value Algorithm Source
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETG7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 154.0
  • Bit_score: 249
  • Evalue 1.40e-63
ABC transporter permease {ECO:0000313|EMBL:EZQ17525.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 155.0
  • Bit_score: 253
  • Evalue 1.40e-64
putative permease component of ABC transporter similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 154.0
  • Bit_score: 243
  • Evalue 2.90e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
ATGGCATTGTCGCGCGAAACCATCGCAAACGGCGTGCTGGCGCTTTTGTTGCTCGTGGTGCCCTTGCTGGCCGCCGCGTCGGGCGAAACCTTCTACATCACGCTCGCCACGCGCATCGTCATTCTCGCGCTGGCAGCGCTTGGCCTCAACATCGCGCTCGGCCTCGGCGGGTTGGTGTCGTTCGGCCACGCGGCCTTCTTCGGCCTCGGCGGCTATGTCGCCGGTATCCTCGCCACCCACGCCTTCAATGGCGAGACGGTGCTGTTCGGCCTGCCGGCCACAACCTCGATGCCAGTGATCTGGCTGGTGGCGGTCCTGCTGTGCGGGCTGGTTGCGCTGCCGATCGGGGCGATATCCCTGCGCACCTCCGGCGTCTATTTCATCATGATCACGCTCGCCTTCGCGCAGATGATCTACTACTTCGCCGTGTCCTGGCCCGACTATGGTGGTGAGGACGGGCTGTCGCTTTAT
PROTEIN sequence
Length: 157
MALSRETIANGVLALLLLVVPLLAAASGETFYITLATRIVILALAALGLNIALGLGGLVSFGHAAFFGLGGYVAGILATHAFNGETVLFGLPATTSMPVIWLVAVLLCGLVALPIGAISLRTSGVYFIMITLAFAQMIYYFAVSWPDYGGEDGLSLY