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SCN18_30_10_14_R5_P_scaffold_3988_3

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 1683..2162

Top 3 Functional Annotations

Value Algorithm Source
Formate dehydrogenase {ECO:0000313|EMBL:EXL03191.1}; EC=1.2.1.2 {ECO:0000313|EMBL:EXL03191.1};; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 159.0
  • Bit_score: 264
  • Evalue 6.20e-68
UPI0003D05E20 related cluster n=1 Tax=unknown RepID=UPI0003D05E20 similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 159.0
  • Bit_score: 261
  • Evalue 2.80e-67
NADH dehydrogenase (ubiquinone) 24 kDa subunit similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 159.0
  • Bit_score: 259
  • Evalue 4.00e-67

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGGTTTTGCAGCCGGCAAGTACCGAGATAGAGGCGCATGCCGCGTCGATCGTCGACGACATGAAGGACCTTGAGGGGCCTCTTCTGCCGATATTGCACCAAATCCAGGAAGAATTCGGCTACGTGCCGCAAGAGGTTCTTCCGGTTATCGCCTCGAAGCTCAATCTCTCTCGCGCGGAAGTCCACGGCGTCGTTTCCTTCTATCACGAGTATCGCAAGCACCCGGCCGGACGCCATGTGCTGAAGCTGTGCCAGGCGGAATCCTGCCAGTCCATGGGCAGCGACGCGGTCGCCGCGCGGGTGATGCAGGCGCTCGGCATTGATTTTCATCAAACCACGCTCGACGGCGCGGTGACGCTGGAGCCCGTATACTGCCTCGGGCTTTGCGCCTGCTCGCCCGCCGCCTTGCTCGATGGCGAGGTCATCGGCCGGGTCGACGCTGAAAAGATCGACGAAATCCTGGCGGAGGTTCGCTCATGA
PROTEIN sequence
Length: 160
MVLQPASTEIEAHAASIVDDMKDLEGPLLPILHQIQEEFGYVPQEVLPVIASKLNLSRAEVHGVVSFYHEYRKHPAGRHVLKLCQAESCQSMGSDAVAARVMQALGIDFHQTTLDGAVTLEPVYCLGLCACSPAALLDGEVIGRVDAEKIDEILAEVRS*