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SCN18_30_10_14_R5_P_scaffold_6264_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(1105..1668)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D03675 related cluster n=1 Tax=unknown RepID=UPI0003D03675 similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 187.0
  • Bit_score: 339
  • Evalue 1.30e-90
Periplasmic protein involved in polysaccharide export {ECO:0000313|EMBL:ETA72615.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 187.0
  • Bit_score: 341
  • Evalue 4.70e-91
polysaccharide exporter similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 187.0
  • Bit_score: 339
  • Evalue 4.70e-91

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGAAAAGCCTCGCAGTCTTGTTCAGCGCTCTCGTCGCCGCTTCGGCCTTGGCCGGCTGTTCAAGCTATAGGCCGACACCTGCCGCCTTCCATGAAGTTCTCGACCAGCCCTATCGCCTCGGCGCCGGTGACCGCATCAGGGTCACGGTGTTTGAACAGGAGGGCCTGACAAATACCTACAGCGTCGATCAATCAGGCTACATTTCATTCCCGTTGGTTGGCGCGGTTCCCGCCAGAGGCCACACCGCACAGCAGTTGGAGGCGGAAATCGCCGCGAAACTGCGGCAGGGTTACCTGCGCGACCCCGACGTCTCCATCGAAATGGACCGCTACCGTCCAATCTTCGTCATGGGCGAAGTTGGCGCTGCCGGACAATATTCCTACGTGCCGGGCCTCACGGTGCAGAAGTCGATTGCCATTGCAGGCGGCTTCTCGGCACGCGCCAATCAGGAAAGCGTCGACATAACACGCGACATCAACGGCAAGGTCATGACCGGGCGCGTTCGCACTTCGGATCCGCTGATGCCGGGCGACACTGTGTATGTCCGCGAACGGCTATTCTGA
PROTEIN sequence
Length: 188
MKSLAVLFSALVAASALAGCSSYRPTPAAFHEVLDQPYRLGAGDRIRVTVFEQEGLTNTYSVDQSGYISFPLVGAVPARGHTAQQLEAEIAAKLRQGYLRDPDVSIEMDRYRPIFVMGEVGAAGQYSYVPGLTVQKSIAIAGGFSARANQESVDITRDINGKVMTGRVRTSDPLMPGDTVYVRERLF*