ggKbase home page

SCN18_30_10_14_R5_P_scaffold_6304_3

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(1339..2130)

Top 3 Functional Annotations

Value Algorithm Source
Putative GntR family transcriptional regulator n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GV45_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 37.8
  • Coverage: 246.0
  • Bit_score: 150
  • Evalue 2.00e-33
Putative GntR family transcriptional regulator {ECO:0000313|EMBL:GAB07470.1}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.8
  • Coverage: 246.0
  • Bit_score: 150
  • Evalue 2.80e-33
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 33.9
  • Coverage: 239.0
  • Bit_score: 111
  • Evalue 2.20e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGGCAGCTATCCAGAGATCATCCAAGAAGTCGTCCAGCGCTGATCCGACCAATGCACCGCAAGCCAGCCGACGCTCGCTTTCGGACCAAGTCGCCCAGCGCATTTCCGACGACTACATCATCAGTGAAAAGATCCCGTCAGGTTCACTGCTTCCGAGCGAATCGGAACTTTGCAGCATCTACGGCGTCTCTCGCGTCACCATACGTGCCGCCGTGCGCAGCATCTGGGACCAGGGCCTGATCAGTGTGCGCAACGGCGTCGGTGCGGTGGTCCTTCCACGCGCCAGAGAAGTTCGCCACGGTCTTGATCGGCTGGCGTCTATCGACACTTTTGCCCGCGAGACTGGCCACCGGGTGGAAACCGGTCACCTGAGCTGGGAGACTGTGCAGGCAGACGCCGAGATGAGCAGGAAGCTGCAAATACCGGTTGGCGCGGATGTGCTTCAGGTTCAACGCAGCAAGATCGTCGACGACGAGCCCGTTGCCTGGATCATCGACAGCTCACCTCTCGCCATGATCGACGAGAAGGCCATCCGCAAGAAGTTCAACGGTTCGATCCTCGACGTTCTTCTCAAGGACGCCCGCTACCGGATCGATTACGCAGACAGCGAAGTCAAGCCATGTATCGCCCGCGGCAAGGTCAAGGAGATCATGTCGGGCGATCAGGACGGATTGCTGCTGTTTCTCGACACGCTGACAATGACCATGGACGGCGCCCCTATCCTGTGGGGACAGGTGTGGCTTGATCCGTCGCATTTCCGCTTCGCGTTTCACCGACGCCGGTTCCGCTAG
PROTEIN sequence
Length: 264
MAAIQRSSKKSSSADPTNAPQASRRSLSDQVAQRISDDYIISEKIPSGSLLPSESELCSIYGVSRVTIRAAVRSIWDQGLISVRNGVGAVVLPRAREVRHGLDRLASIDTFARETGHRVETGHLSWETVQADAEMSRKLQIPVGADVLQVQRSKIVDDEPVAWIIDSSPLAMIDEKAIRKKFNGSILDVLLKDARYRIDYADSEVKPCIARGKVKEIMSGDQDGLLLFLDTLTMTMDGAPILWGQVWLDPSHFRFAFHRRRFR*