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SCN18_30_10_14_R5_P_scaffold_6363_3

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(1635..1973)

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI000363E7FE similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 108.0
  • Bit_score: 182
  • Evalue 2.00e-43
Multidrug transporter {ECO:0000313|EMBL:EXL04099.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 108.0
  • Bit_score: 176
  • Evalue 1.60e-41
small multidrug resistance protein similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 108.0
  • Bit_score: 152
  • Evalue 4.80e-35

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
GTGATACTCTGGAACTATATCTACCTGCTGGTTGCGGTCATGTTCGAGGTCGTGGCGACGACAGCCTTGAAGGAGACGCAGGGCTTCACCCGGTTGGTGCCATCGCTTGTTGCGGTCGCTGGCTATGCGTTTGCGTTCTATTTCCTGTCGCTGCCTTTGCGCACCATGCCGGTCGGCGTTGTCTACGCCATCTGGTGCGGGGCCGGCATCATCCTCATCACCGCCATAGGCTGGCTATGGTTCCGTCAGGCTCTCGATTTGCCGGCTTTGATCGGCATGGGTTTGATCATGGCGGGCGTCATCGTCATCAATCTGTTTTCGAAGACCCTCGTTCATTGA
PROTEIN sequence
Length: 113
VILWNYIYLLVAVMFEVVATTALKETQGFTRLVPSLVAVAGYAFAFYFLSLPLRTMPVGVVYAIWCGAGIILITAIGWLWFRQALDLPALIGMGLIMAGVIVINLFSKTLVH*