ggKbase home page

SCN18_30_10_14_R5_P_scaffold_5958_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(354..572)

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KLE8_METEX similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 72.0
  • Bit_score: 114
  • Evalue 3.30e-23
Uncharacterized protein {ECO:0000313|EMBL:KKN82616.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 72.0
  • Bit_score: 119
  • Evalue 1.10e-24
transposase of ISMdi7, IS21 family (ORF 1) similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 72.0
  • Bit_score: 107
  • Evalue 8.80e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 219
ATGGAGGCGATCCCGAAGGACGTCGTGACCTGTGCCGTGACCGAGGCGATCCGGCTCGGCGCAATCGGCTTCGATGCCGTCAAGCAGATCGCACTGGCCCGGATCGAACGACGGCCGGCCAGGCTCGATCTCGCCGCCTATCCCCATCTGCCGAAGACCAGCGTGAAGACGACGTCGGCGGCCGATTACGCCATCCTCATTCCCGGGAGGGCGGCATGA
PROTEIN sequence
Length: 73
MEAIPKDVVTCAVTEAIRLGAIGFDAVKQIALARIERRPARLDLAAYPHLPKTSVKTTSAADYAILIPGRAA*