ggKbase home page

SCN18_30_10_14_R5_P_scaffold_3434_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(718..1668)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid transport system permease protein LivM id=4346124 bin=GWC2_Methylomirabilis_70_16 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 305.0
  • Bit_score: 334
  • Evalue 9.00e-89
livH; branched chain amino acid ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 315.0
  • Bit_score: 309
  • Evalue 6.70e-82
Tax=GWC2_Rokubacteria_70_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 305.0
  • Bit_score: 334
  • Evalue 1.30e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
ATGACACGCAACAGCAAGATTTTTCTCGCAGCGGCACTGGCCGTCTTGCTCGTAGGCCTTCTCGCTCCGCATGTGCTGAAGAACCCTTTCTATTTCTTCGCCGGTTACGTCATCTTGCAATACGTCGTCATTGCCACAGGCTGGAACATCCTCGGAGGCTATGCCGGCTACATCAATTTCGGAGCTGCCGGGTTCTTCGGCGCAGGGGCCTACGCATCCGCGTTCCTGTTCAACACCTTCGACATTCCGTTGTGGGGCGGCCTCGTCGCCGCCTGCCTGATCGGTGCACTGCTGGGCGTCCTGATGGGCTACCTGACGCTGCGCATTCAGGGCGTTTACTTTGCCATCGCCACGTTGGGGCTGGTCATCATTCTTGAAACGATCATCCATAACATTCCCGCACTCGGCGGAGCCCGCGGAATAGTCGTCTACGGCCCTCCGCCGCCTGCATGGGCGGCAGGCCCTTCGCAATACATGTTCTTCCTCATGTTGCTCATTGCCGTCGCCAGCGTGTCGTTAGCGCGCTGGATGCAGATATCCTGGGTCGGGCGTGGTCTGCGTGCCGTTCGCGCCAGCGAGAACGCGGCGGAATGCTCCGGCGTGCCGACATTGCGGCTGAAGCTACTTGCCTGTGCCGCCAGCGGTGCGGTCCTGGCTGCAGCGGGCGCGCCCTATCCCTTCTACACTTCCTTCGTCGAACCGGTCACGGTGTTCAGCCTGCTCATCGGCCTCAACGCCATTGCCATGCCGTTGATCGGCGGCACGCGAACCTGGCTCGGCCCTGTCATCGGCGCCCTGCTCCTAGCTTCCACCCAACAGATCGCCACCATCACAATATCGTCCGAACTGAACATACTTTTCGTCGGCATCGTCCTGATCGCGTTCGTCGCGCTGGCGCCGAATGGCATTCTGGGCCTTGTCGCTCGTCGTTCAAGGGAGACGCCGCGATGA
PROTEIN sequence
Length: 317
MTRNSKIFLAAALAVLLVGLLAPHVLKNPFYFFAGYVILQYVVIATGWNILGGYAGYINFGAAGFFGAGAYASAFLFNTFDIPLWGGLVAACLIGALLGVLMGYLTLRIQGVYFAIATLGLVIILETIIHNIPALGGARGIVVYGPPPPAWAAGPSQYMFFLMLLIAVASVSLARWMQISWVGRGLRAVRASENAAECSGVPTLRLKLLACAASGAVLAAAGAPYPFYTSFVEPVTVFSLLIGLNAIAMPLIGGTRTWLGPVIGALLLASTQQIATITISSELNILFVGIVLIAFVALAPNGILGLVARRSRETPR*