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SCN18_30_10_14_R5_P_scaffold_3603_4

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 2881..4134

Top 3 Functional Annotations

Value Algorithm Source
Lipid A core-O-antigen ligase-like enyme n=1 Tax=Phyllobacterium sp. YR531 RepID=J3C4T8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 34.3
  • Coverage: 396.0
  • Bit_score: 219
  • Evalue 4.20e-54
Uncharacterized protein {ECO:0000313|EMBL:EZQ17055.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 399.0
  • Bit_score: 455
  • Evalue 6.50e-125
O-antigen ligase-related protein similarity KEGG
DB: KEGG
  • Identity: 30.9
  • Coverage: 405.0
  • Bit_score: 196
  • Evalue 1.40e-47

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1254
ATGGCGTTGCCAAAGAACGGCATCGATCGAAACAACGTCATTTCGATCTTTCTGATGGGAGCGCTTCCCGCAGTCGGCGGGAGCGTGATTTCCGTCATGCTCTACTCGTTCTTCGTCTGGGGAGTTCTTTCGCTTGCGCTGCAGCGATTCGAATTCCAGATGACTCGTTCTGATCGGGCGCTGGCTTTGACGTTTACCGCCTTTGCGGCGTTGATCGTGTTCACCGCACTGATTGCACCGAACAGATCCGAAATCCCGCATTCGACAATCTGGCTTCTTGCCTTCCTCGCGCCTTGGGTCGTCATTCCGAGGCTAAGGGCGACCCGGGACATCGACTTTCTCCCACCCTACATCGCAGGCGCTGCCGTTGGCGCCGTGATTGCAGCGTTCGTAGCGCTCATACAATCTGGACTGTTGGGGCTTCGATCGGAGGGCGGCGCGGGCAACCCCGCGGTCTTTTCGATCATGGCGCTTTGCCTGATGGGAATAGGCGGCCTCAATATCTCGTCCACCTCCAAGGCTCGACAAATACTGGCAATTGCGGCGGTCGTTGGCGGAGCGGTCGCATTGATAATGTCGCTTACGCGCGGCGTCGCCATTGCAATTTTTCCGGTCTGCGTTCTGTTGCTGATATACAATCCTGCCCGTTGGCGTTCCATTCTCGTTCGCCCCGCTAGTCTCGCGATCCTTACCGCCGCAACGGTTGCGTTCTACAGTGTCGAGCGGATGCTTGACTTTCGTTGGGAACAAACGGTCCGCGAGTTTCACCGCATCCTGATGGGCGAGCAGACGACGAAAAGTATCGGCGAGCGGCTCAGACTTTGGGAAGCAGGGCGGGACGCTTTTCTCGAATCGCCCTTCTGGGGCCACGGCATTCAAAACAGGATGGCATCACTGGTGCCGGAACTGTCTAAAGACGACCTGCCGATTCGTGGTTTCACCCACGCCCACAACGGCTTTCTTTCTTTTGCTCTGGACGGTGGAATCCTGACTTTGACCGCACTGGTTGCAGTTCTCTGCGTGCCAGTCTTTATCGCTTGGCGCGCACCGCGCGATTCCAGCTACCGGGCACGGTTGTTTCTCGCGCTGATCGTTTCAATTTCCTACGCCGTCTCTGGCATGACACAGATCATGTTCAAGCACGACATCATGGACGCGTTCTTTGTGTTTTGCGCCATATTGATTGCAGCATCCATACCGGCTGGTTCCGGGTCGAACGCAACCAAGGCCGACGCAAAACCGCCCGCTTCCTGA
PROTEIN sequence
Length: 418
MALPKNGIDRNNVISIFLMGALPAVGGSVISVMLYSFFVWGVLSLALQRFEFQMTRSDRALALTFTAFAALIVFTALIAPNRSEIPHSTIWLLAFLAPWVVIPRLRATRDIDFLPPYIAGAAVGAVIAAFVALIQSGLLGLRSEGGAGNPAVFSIMALCLMGIGGLNISSTSKARQILAIAAVVGGAVALIMSLTRGVAIAIFPVCVLLLIYNPARWRSILVRPASLAILTAATVAFYSVERMLDFRWEQTVREFHRILMGEQTTKSIGERLRLWEAGRDAFLESPFWGHGIQNRMASLVPELSKDDLPIRGFTHAHNGFLSFALDGGILTLTALVAVLCVPVFIAWRAPRDSSYRARLFLALIVSISYAVSGMTQIMFKHDIMDAFFVFCAILIAASIPAGSGSNATKADAKPPAS*