ggKbase home page

SCN18_30_10_14_R5_P_scaffold_3321_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(721..1113)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: cytidine deaminase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1A30E similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 130.0
  • Bit_score: 265
  • Evalue 2.10e-68
cytidine deaminase, homotetrameric similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 130.0
  • Bit_score: 256
  • Evalue 2.80e-66
Cytidine deaminase, homotetrameric {ECO:0000313|EMBL:AGB44296.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 130.0
  • Bit_score: 256
  • Evalue 1.40e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
ATGTCGCATGACCTCTACCTCGCCGCGAAAGCGGCCATGGCCAAGGCCTATGCGCCCTATTCGAAGTTTCCTGTGGGCGCTGCCATCCGCACCGAGGATGGCCGGGTTTTCGCCGGCGCCAACATCGAAGTCGCTTCCTATCCCGAAGGCTGGTGCGCCGAAACCACGGCGCTTGGCCACTACATCATGGGCGGCGGCGGCAAGATCGTCGAAATCGCCGTGATTGCCGAACGCATGGCCAAATGTTCGCCCTGCGGAGGATGCCGTCAGCGGCTGGCCGAGTTCACCCGGCCCGACACCCGGCTCTATCTGTGCGATGAAACCGGCGTGGCTGAAACCGTAACGATGGGCGACATGCTGCCCTACGGCTTCCGCGGCGATATCCTGAAATGA
PROTEIN sequence
Length: 131
MSHDLYLAAKAAMAKAYAPYSKFPVGAAIRTEDGRVFAGANIEVASYPEGWCAETTALGHYIMGGGGKIVEIAVIAERMAKCSPCGGCRQRLAEFTRPDTRLYLCDETGVAETVTMGDMLPYGFRGDILK*