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SCN18_30_10_14_R5_P_scaffold_6756_3

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 1495..2223

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FID3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 244.0
  • Bit_score: 318
  • Evalue 3.90e-84
Secretion protein HylD {ECO:0000313|EMBL:EZQ16348.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 244.0
  • Bit_score: 322
  • Evalue 3.80e-85
RND family efflux transporter, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 242.0
  • Bit_score: 308
  • Evalue 1.10e-81

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Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGACCGCCTGGAAGCAGCTAGTTTTAGCCCTTGTGATCCTTGTCGCGGCTGCCGCCGCCTGGGTCAGCTTTTTTCCGGGCGCGCCGGAAGTGCTGGCCCGTTGGGGCATTGATTGGGCCCACGCCTCGACGCAAAAGACCGAAACCGGTTCAATTCGGCGTGATGGACAGGGCGGCAATTCCGATCGCCAGCAGGTCATGGTCGTTGCCGCACCGGCGACCACGGCCACCATCAACGACCGCCTGCAGGCTATCGGCACAGGCCGCGCCAAGGCGACCGTGGCCGTCACGCCCTATGGATCGGGACGCCTGACGGACATCCTCGTCCAGTCCGGTGCGCATGTCGAAAAGGGTGAGGTTATCGCCGAACTGGATTCGGCAACCGAAGAAATCGCCGTCGAGCGCGCCAAGGCCGAACGCGATGACGCCGTGGCCAAGGCCGAGCGCGTGCGCCAGTTGCGCGCCTCCAATGCGGCGACGCAGGTGCAGTTGACCGATGCCGAACTGGCATTGCGCAACACCGAGCTTTCGCTGCACGACGCGCAAGTGGCGCTGGAGCGGCGCTCGATCACCTCCCCCATTTCCGGTGTCGTCGGCATCCTGCCGATCGAGGCGGGCAACTACGTCACCAGCCAGTCTTCCATCGCCACCATCGACGACCGCTCGAGCATCCTTGTCGATTTCTACGTGCCGGAGCGCTTCGCCGCTGCAATAAAGATAGGCGCTGCG
PROTEIN sequence
Length: 243
MTAWKQLVLALVILVAAAAAWVSFFPGAPEVLARWGIDWAHASTQKTETGSIRRDGQGGNSDRQQVMVVAAPATTATINDRLQAIGTGRAKATVAVTPYGSGRLTDILVQSGAHVEKGEVIAELDSATEEIAVERAKAERDDAVAKAERVRQLRASNAATQVQLTDAELALRNTELSLHDAQVALERRSITSPISGVVGILPIEAGNYVTSQSSIATIDDRSSILVDFYVPERFAAAIKIGAA