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SCN18_30_10_14_R5_P_scaffold_12398_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(562..1209)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanhaiticus D15-8W.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 95.0
  • Bit_score: 104
  • Evalue 1.10e-19
dapF_2; diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 96.0
  • Bit_score: 103
  • Evalue 5.00e-20
Diaminopimelate epimerase n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6W3K6_9ALTE similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 95.0
  • Bit_score: 104
  • Evalue 7.90e-20

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
TCGGAAGTGGAGCAGTGTGGCAATGGCGCACGCTGCGTAGGCCGGCTGGTAGCCGACCGTCTGGCACGCCAGCAAGTCCGCATGGACAGCCCCGGCGGACGCGTCGACGTGCAACTGGGAAACGATGGCTTGGTGTCCGTGAACATGGGCGTTCCCAACTTCGATCCCAGCGCCCTGCCCTTCGAGGCGTCGCGTGAGGCAGACATTTATCCATTGCGCATCGGCGAATCCGAGTTGCGCATCAGCGCGGTGTCCATGGGCAATCCGCATGCCGTGATCCAGGGGCGGGGCCGCGCGGACCTGACCGCAATTGCAAACCTGGTCGAATTGCCCATCTACTTCATCGCCCTGTTCGTGCTTTTGCCAAAGTTCGGACTTGCAGGCGTTGCCGCGTGCTGGGCCGGGCGTACCCTGCTCGACTACATCATCTTGCGACTTATTGCGGGTCGGCTTTTGCATGCCGAGAACGCCCGCAGCTTGGCTGAAGCAGCGAGCGTATTCGCAATTGTCGTATTTATTGCATGTGTTGGAGCTTATCCGCTCGCATTGAAGATCGCAGGGGTTGGCTTAACCCTCTGCATAAGCGCGGCCATAGCGTATCGGTTCGGTCTCTCGCCGTCGAAATTTTTCACATTAATTAGAGGATAG
PROTEIN sequence
Length: 216
SEVEQCGNGARCVGRLVADRLARQQVRMDSPGGRVDVQLGNDGLVSVNMGVPNFDPSALPFEASREADIYPLRIGESELRISAVSMGNPHAVIQGRGRADLTAIANLVELPIYFIALFVLLPKFGLAGVAACWAGRTLLDYIILRLIAGRLLHAENARSLAEAASVFAIVVFIACVGAYPLALKIAGVGLTLCISAAIAYRFGLSPSKFFTLIRG*