ggKbase home page

SCN18_30_10_14_R5_P_scaffold_15544_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(1..999)

Top 3 Functional Annotations

Value Algorithm Source
Dihydropyrimidine dehydrogenase {ECO:0000313|EMBL:EZQ12826.1}; EC=1.3.1.1 {ECO:0000313|EMBL:EZQ12826.1};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 332.0
  • Bit_score: 662
  • Evalue 2.10e-187
dihydropyrimidine dehydrogenase (EC:1.3.1.1) similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 332.0
  • Bit_score: 645
  • Evalue 7.10e-183
Probable oxidoreductase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98K45_RHILO similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 332.0
  • Bit_score: 645
  • Evalue 2.50e-182

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
CTGATCGCATCGATCATGGTGCCCTGCGTGGAAGAAAGCTGGAAGGCGATCCTGCCGCTGGTCGAGGAAACCGGCGCTGACGGCATCGAGCTCAATTTCGGTTGCCCGCACGGCATGTCCGAGCGCGGCATGGGCGCTGCTGTCGGTCAGGTGCCGGAATATATCGAGATGGTGGTGCGCTGGTGCAAGCAGTACACGCGCATGCCGGTCATCACCAAACTGACACCCAACGTCACCGACGTGCGCAAGCCGGCAAGGGCGGCGAAGGCCGGCGGCACCGATGCGGTCTCATTGATCAACACGGTCAACTCGATTACCTCGGTCAATCTCGACACGTTCTCGCCAGAACCGTCCATCGACGGCAAGGGCTCGCATGGCGGCTATTGCGGCCCGGCGGTCAAGCCGATGGCGCTGCACATGGTTGCCGAAATCGCCCGCGACGGCGAAACGCGCGGCCTGCCGATTTCCGGAATCGGCGGCGTCACCACTTGGCGCGATGCAGCCGAATTCATGGCGCTCGGCGCCGGCAACGTGCAGGTGTGCACGGCTGCGATGACCTATGGCTTCAAGATCGTGCAGGAAATGATTGCCGGTCTCGAGAACTGGATGGACGAAAAGGGCCATCGCAGCCTCGACGACATCGTCGGACGCGCAACGCCGAACGTCACCGACTGGCAGTATCTCAACCTGAACTATATCGCCAAGGCGCATATCGACCAGGAAGCCTGCATCAAGTGCGGCCGTTGCCACATCGCCTGCGAAGACACCTCGCACCAGGCCATCACGTCGATGGTCGATGGAGCCAGGCACTTCGAGGTGATGGAAGACGAGTGCGTCGGCTGCAATCTGTGCGTCAATGTCTGCCCGGTGGAAGGCTGCATCACGATGGTGCCGCTGGCGGCCGGGGAACTCGACCAGCGCACCGGCAAGCCCGTCTCGCCGGTCTACGCCAACTGGACGACGCACCCGAACAACCCGATGGCGCGGGTGGCGGCGGTG
PROTEIN sequence
Length: 333
LIASIMVPCVEESWKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVRWCKQYTRMPVITKLTPNVTDVRKPARAAKAGGTDAVSLINTVNSITSVNLDTFSPEPSIDGKGSHGGYCGPAVKPMALHMVAEIARDGETRGLPISGIGGVTTWRDAAEFMALGAGNVQVCTAAMTYGFKIVQEMIAGLENWMDEKGHRSLDDIVGRATPNVTDWQYLNLNYIAKAHIDQEACIKCGRCHIACEDTSHQAITSMVDGARHFEVMEDECVGCNLCVNVCPVEGCITMVPLAAGELDQRTGKPVSPVYANWTTHPNNPMARVAAV