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SCN18_30_10_14_R5_P_scaffold_11209_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(941..1324)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EL24_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 126.0
  • Bit_score: 179
  • Evalue 1.50e-42
Secretion protein HylD {ECO:0000313|EMBL:EXL09618.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 126.0
  • Bit_score: 203
  • Evalue 1.80e-49
RND family efflux transporter, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 127.0
  • Bit_score: 173
  • Evalue 2.30e-41

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Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
GTTTCGGCGATAGATAACCGCATCGACGAGAAAAGCCGCACCTTGTGGGTGCAGGCGACGATAGCCAACCCATCCGATTCGCTGCGCGCCGGCATGGCCTTCCAGATCGCCATGCAGTTTGCCGGAGACACCTATCCCGCCGTCAGCCCGCTCGCCGTGCAGTGGGGCACCGATGGCGCCTTCATCTGGACGGTGGAAGACGGCAAGGCCAAGCGCGTGCCGGTGCGCATCGTCCAGCGCAATACCGATAGCGTCCTCATCGATGCACCGATCAAGCCAGGCGCCATTGTCGTTACCGAAGGCGTGCAAAGCATCCGCGACGGCGGCGGCGTGAGCGTCGCGGCAGGCGGCGCATCACCGCTTGCCGAAGCCGACGGCTCGTGA
PROTEIN sequence
Length: 128
VSAIDNRIDEKSRTLWVQATIANPSDSLRAGMAFQIAMQFAGDTYPAVSPLAVQWGTDGAFIWTVEDGKAKRVPVRIVQRNTDSVLIDAPIKPGAIVVTEGVQSIRDGGGVSVAAGGASPLAEADGS*