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SCN18_30_10_14_R5_P_scaffold_9924_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(101..1150)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter of mannopine, substrate binding protein n=1 Tax=Rhizobium radiobacter RepID=K7XK27_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 346.0
  • Bit_score: 456
  • Evalue 1.30e-125
ABC transporter of mannopine, substrate binding protein {ECO:0000313|EMBL:AFX65621.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 346.0
  • Bit_score: 456
  • Evalue 1.90e-125
spermidine/putrescine transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 352.0
  • Bit_score: 348
  • Evalue 1.40e-93

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
ATGAAACTGCTAAGCCGGCACCTTTCGGCCCTTATGATCTCGTCTGCGATACTGGTCGGCGGCATGGCAATCGCCCAAGCAGCGGATGTTGTCATCGTAACTCCGGGTGGCGCATCCCAGGAGGCGGCGCGAAAGGCACTGTGGGAGCCAGCAGCGAAAAAGCTGGGGATGACGTTCGAATCAGACACCTCCGAAAGCTGGACTGAGGCGCGTGCCCAGGTCGATGCGGGCGCGGTGACCTGGGACATCGTCTCGCTCAACATGGGCGAAGTCCAGTTGGCGGTGGACGCAGGTGTGATCGAAAAGCTTCCCGCCGACATCGTTGACCGGAACGATTTCGTTCCGGGCTCCGTCAATGACTATTGCGTGGGGAACAGCGTATTCTCCACCGTTATCGGATACAGCACTGCGAAATTTGGTGACTCAGGTCCCAGTAACATGGTCGAATTTTGGGACGTCAATAAATTCCCGGGCAAAAGGGGGCTGTACCGCAGTCCTCGCGGCAACATCGAAGCGGCCGTGCTGGCGCTCGGCAAGTCTCAGTCCGAGGTGTACGATTTCCTTTCGACCGAAGAAGGTCGTAAGGCCGCCTTCGCCAAGCTCGCCGAAATCAAGGATCACGTCGTATGGTGGGAGACTGGCTCCCAGGCCACCCAACTCGTGCAGTCCGGTGAAGTCGACTTGATCTACAGCTGGAACGGTCGAGTGATGGCGGCCATCGACGCCGGCGCGCCCTACAAGATCGTCTATAAGGATGGCCTCCTGGACAACGACTGCTATGCAATCGTCAAGGGCTCGCCGCATCCCGAGAACGCCATCACCTTCCTCAAGGAAATCTCCAAGGCCGAATACGTCAAGGATTACCCGAAATACATCGCCTATGGTGGGGCAAATCTGAAGGCGTATGAGGGCTATGACGAAGCCACACTGGCACGCCTGACATCTTCTCCGGAAAACGTTGCGCAGCAGTATCCGACGAATGTCGACTTCTGGGGCAAGAACGGCACGATATTGTCCGAAGAATTCGACGAGATGCTGCTCGGTAACTAA
PROTEIN sequence
Length: 350
MKLLSRHLSALMISSAILVGGMAIAQAADVVIVTPGGASQEAARKALWEPAAKKLGMTFESDTSESWTEARAQVDAGAVTWDIVSLNMGEVQLAVDAGVIEKLPADIVDRNDFVPGSVNDYCVGNSVFSTVIGYSTAKFGDSGPSNMVEFWDVNKFPGKRGLYRSPRGNIEAAVLALGKSQSEVYDFLSTEEGRKAAFAKLAEIKDHVVWWETGSQATQLVQSGEVDLIYSWNGRVMAAIDAGAPYKIVYKDGLLDNDCYAIVKGSPHPENAITFLKEISKAEYVKDYPKYIAYGGANLKAYEGYDEATLARLTSSPENVAQQYPTNVDFWGKNGTILSEEFDEMLLGN*