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scnpilot_p_inoc_scaffold_554_8

Organism: scnpilot_dereplicated_Plasmid_Burkholderiales_6

RP 1 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(6034..6327)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=2 Tax=Pseudomonas aeruginosa RepID=G2UCA2_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 95.0
  • Bit_score: 155
  • Evalue 3.90e-35
XRE family transcriptional regulator {ECO:0000313|EMBL:AJA17323.1}; TaxID=1215087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 95.0
  • Bit_score: 155
  • Evalue 5.50e-35
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 91.0
  • Bit_score: 146
  • Evalue 3.90e-33

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Taxonomy

Pseudomonas putida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 294
ATGACGACGCTCAAGCCATCGCTGCCCGATGCGTTGCGAAAGATCAGGAAAGCACGTGGTCTGAGCCAAGAGGCGTTCTCGGACGTGTCCAGCCGCACCTATCTAAGTTCGCTGGAGCGAGGGCTGAAAAGCCCAACGCTAAACAAGCTGACCGAACTGTGCGAAGTCATGAAGGTTCATCCGCTCACGTTGCTGACGCTGGCGTATGCCGGTGATAGCGAGCAGAAGGCCGATCAATTGCTGGAGCAGGTGCGACAGGAGCTTGAGGCGCTACTAAATCAAAATGGAGATTGA
PROTEIN sequence
Length: 98
MTTLKPSLPDALRKIRKARGLSQEAFSDVSSRTYLSSLERGLKSPTLNKLTELCEVMKVHPLTLLTLAYAGDSEQKADQLLEQVRQELEALLNQNGD*