ggKbase home page

SCNpilot_cont_1000_bf_scaffold_1137_1

Organism: scnpilot_dereplicated_Plasmid_Rhizobiales_2

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(2..205)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbC n=2 Tax=Oligotropha carboxidovorans RepID=B6JJW3_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 68.0
  • Bit_score: 100
  • Evalue 8.00e-19
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 68.0
  • Bit_score: 100
  • Evalue 2.50e-19
Uncharacterized protein {ECO:0000313|EMBL:AEI05260.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 68.0
  • Bit_score: 100
  • Evalue 1.10e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGAACCGCCGCGTCTTGCGCCATCATCGTCAACTCACCGGGGCCATCGCAGCCGTAGCTGCCAGCATGATGCTCGCACCAGCCGCCTATGCCTCCGGTTCGTCGATGCCCTGGGAACAGCCACTTCAACAAATCCTCCAGTCGATCGAGGGGCCGGTTGCCAAGATCGTCGCCGTCATCATCATCATCGCGACAGGCCTGGGG
PROTEIN sequence
Length: 68
MNRRVLRHHRQLTGAIAAVAASMMLAPAAYASGSSMPWEQPLQQILQSIEGPVAKIVAVIIIIATGLG