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SCNpilot_expt_500_bf_scaffold_339_17

Organism: scnpilot_dereplicated_Plasmid_Proteobacteria_1

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(15336..15674)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbC n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L174_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 102.0
  • Bit_score: 99
  • Evalue 3.00e-18
Conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 102.0
  • Bit_score: 99
  • Evalue 9.30e-19
Conjugal transfer protein TrbC {ECO:0000313|EMBL:ACX96447.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.1
  • Coverage: 102.0
  • Bit_score: 99
  • Evalue 4.20e-18

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGAAATCGCTTAACACCCGCAAGGTCGTCAACGTCGCCTTGATGGCTGGCCTGGCCCTGCTGGCTTGCAAGTCGGCTATGGCCGGCACCGGGCCTGACATGCCCTGGGATTCCGGCCTCGACAAGCTGGTGAAGAACCTGACCGGCAAGACCGCCCTGGCCATCGGCGTGCTTGCCATGTTCGCCGCCGCCGCCGCACTCGTGTTCGGCGGAGAAATGTCCGAGTTCACGCGCCGCATCATCCTGATGATTCTGGCCGTGGCCCTGATGGTGTCGGGCGCGTCGCTGCTCAACATCTTCTTCGGCATCTCGGGTGCGCTGATTCCTCTGGTGGCCTGA
PROTEIN sequence
Length: 113
MKSLNTRKVVNVALMAGLALLACKSAMAGTGPDMPWDSGLDKLVKNLTGKTALAIGVLAMFAAAAALVFGGEMSEFTRRIILMILAVALMVSGASLLNIFFGISGALIPLVA*