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SCNpilot_expt_500_bf_scaffold_339_49

Organism: scnpilot_dereplicated_Plasmid_Proteobacteria_1

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 41353..42732

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE87A6 related cluster n=1 Tax=unknown RepID=UPI0003CE87A6 similarity UNIREF
DB: UNIREF100
  • Identity: 34.1
  • Coverage: 461.0
  • Bit_score: 219
  • Evalue 6.10e-54
traG2; conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 472.0
  • Bit_score: 218
  • Evalue 4.30e-54
Plasmid transfer factor, traG protein {ECO:0000313|EMBL:CAE27676.1}; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.5
  • Coverage: 472.0
  • Bit_score: 218
  • Evalue 1.90e-53

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1380
ATGGGAGCATTCAACATCTTCATTTCCAAGCTGTTCGGCACCACGCAAAACCCCGCGTGGGCCGACACCCAGCCGCTCAAGACGGTCGCACGCGATACGTCGGGCGTCATCATCGGGGCCAGCGACGGCCAGCCGCTGATCGACGCCAGCATGAACCCTGTGGCCGTGCTCGGCCCCTGCCGCAGCGGCAAGGGCACGTCCATCGTGGTGCCCACGCTGCTGACCTGGCGGGAAAGCGCCATCGTGGCCGACGTGCATGGCGAGCTGTACGGCATCACCGAGCACTGGCGGCGCACTGGCGCGCACAACGAGGTGCGCCGGCTCGCCTTCGGCGACCCGAGCAGCCCGGACACCTTCAACTTCCTGGACGCCATCCCGCGCGGCAAACCGGGCGAGCTGGCCGACATCCAGGCCCTGGCGGCCGCCTTGCTGGGCGACAGCCAGGACGGCGACTACTGGCGTCACCACGCGCAATCGCTGCTGACCCTGTTCATCATCGCCGCGCGCCGCAGCCTGGTCGCCAGCCTGCACGACGTGCAGCAGGCGCTGAACGACAACGCGGCTTTCGGTGCCACCCTTGCCGCCGCCACCTACAGCGACTTCATCCCCGACGACGAGCTGGCCCGCGCGGCCCAGCTCGCGGCGGCGGCCTATGCGGAGCTGGCCGAGAACGCGCGGGCAGCCGTGCGGGCGACGGTCGCCGGCAGCTTGACCATCTTCGCCTCGCCGGACGTGGCGCGGAACACCATGCGCAGCTCGTTCGAGCTGGCCGAGCTGTGCGACGGCAAGGCCGCGATGACGCTCTATCTCACCTTTGCGCCTCACGACCTGGGCCGGCTCCAGCCGTTGATTCGCGCCTTCCTGGCCCAAGTCGTCCGCCACGGCACGCAAGCATGCCGGCAGGCGGCCGCGAGCCGCCTACTGCTGGTGCTCGACGACTTCGCCGCCCTGGGCCGGCTCCCCTTCCTTGAAAGCTCGCTGGCGTACTTGCCCGGCTACGGCATCAAGCCGCTGCTGACCATCCAGAGCTTGACCCAGCTCAACCGCGTCTACGGCGAGGAAAACAGCCTGTGGCAACAGTGCGCCATCCGTACCGTGCTGCCGCTCAACGATTTCAAGACGGCGGCCGTCGTCGCCGAGGACATCGCCGGCATCGCCGGCATCGTCGCGCGGGCCGGCCAAGCCGGCACCGAGCAACGCCAACAGCCCATCACGCCCGACGAGCTGATGCGCCTGGGGAAGCGTGAGGCGATCATCCTAGGCGCGGCCGCGAAGCCCATCCGTGCGGCCACCCTACCCTACTACGAGGACGCGGGTTTCCTGGCGCTTGTGGAGGCCGGCAACGCCGACCCGTTGATGTCGGCCACCGAGGGAGCCTAA
PROTEIN sequence
Length: 460
MGAFNIFISKLFGTTQNPAWADTQPLKTVARDTSGVIIGASDGQPLIDASMNPVAVLGPCRSGKGTSIVVPTLLTWRESAIVADVHGELYGITEHWRRTGAHNEVRRLAFGDPSSPDTFNFLDAIPRGKPGELADIQALAAALLGDSQDGDYWRHHAQSLLTLFIIAARRSLVASLHDVQQALNDNAAFGATLAAATYSDFIPDDELARAAQLAAAAYAELAENARAAVRATVAGSLTIFASPDVARNTMRSSFELAELCDGKAAMTLYLTFAPHDLGRLQPLIRAFLAQVVRHGTQACRQAAASRLLLVLDDFAALGRLPFLESSLAYLPGYGIKPLLTIQSLTQLNRVYGEENSLWQQCAIRTVLPLNDFKTAAVVAEDIAGIAGIVARAGQAGTEQRQQPITPDELMRLGKREAIILGAAAKPIRAATLPYYEDAGFLALVEAGNADPLMSATEGA*