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SCNpilot_expt_1000_bf_scaffold_5314_1

Organism: scnpilot_dereplicated_Plasmid_Burkholderiales_2

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(1..228)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2X9_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 75.0
  • Bit_score: 71
  • Evalue 5.80e-10
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 75.0
  • Bit_score: 71
  • Evalue 1.80e-10
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU38045.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.0
  • Coverage: 75.0
  • Bit_score: 71
  • Evalue 8.20e-10

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 228
ATGAACGACGACCTTGACGAATACGGCAATCGAACGAAGAATTTCGTCAAGCTGTATTCGAACACGGTCGGGCTGTACGAGTACCTTCAGGAGCCACTCAGCCAATTCCTAAAGCAGAACCCTGCAGTCACACTTACGATCGAAGAGGCGGTGAACGACGCCATCCCGGCCGCTCTACTTGATGGCCGAGCTGATATCGGAGTGGTCGCCGAGCCTGTGGACACGGCG
PROTEIN sequence
Length: 76
MNDDLDEYGNRTKNFVKLYSNTVGLYEYLQEPLSQFLKQNPAVTLTIEEAVNDAIPAALLDGRADIGVVAEPVDTA