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SCNpilot_expt_1000_bf_scaffold_5304_curated_3

Organism: scnpilot_dereplicated_Acidovorax_1

near complete RP 40 / 55 BSCG 41 / 51 ASCG 11 / 38
Location: 1641..2357

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA n=1 Tax=Acidovorax sp. KKS102 RepID=K0IEP6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 238.0
  • Bit_score: 471
  • Evalue 6.10e-130
RNA polymerase sigma-28 subunit FliA/WhiG similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 238.0
  • Bit_score: 471
  • Evalue 1.90e-130
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 238.0
  • Bit_score: 471
  • Evalue 8.50e-130

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Taxonomy

Acidovorax sp. KKS102 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGTACACCGCCAAAGGCCAGCTTGATCGCGATGCCATGATCCGCCAGCATGTACCGCTGGTACGGAGGATTGCGCACCACATGATCGCCAAGCTGCCCCCCAATGTCGAACTGGATGACTTGATCCAGGTCGGCATGATGGGGCTGGCCGAAGCTCTGTCGCGCTATGAGGTCGCGCAGGGCGTGCAGTTTGAAACCTTCGCCACCCAGCGCATCCGGGGCGCCATGCTCGACGAGTTGCGCGAGGGTGACTGGATGAGCCGCAGCTCGCGCAAGAGCCAGAAAGACATCGAGCACGCCGTGCACCGGCTGGAACAAAAGCTGGGCCGCAGCCCGCTGGAGTCTGAAATAGCCGGCGAAATGGGCATGAGCCTGGCGGACTACCAGAACCTGCTGGGCAAGGTACGAGGCACCCAGCTGGTGTACCTGGAAGACATGACACATGGCAACGACGACGAGGACGGGTTTCTGGACCGTCACGTTGCCGACAGCGCGGCCGACCCGGTGGAGCTGCTGCGCGATCAGCGGCTCAAGACGTCACTGGTCAACGCCATCAAGACACTCCCCGAGCGCGAGCAGCACATCATGGGCATGTACTACGAACATGACATGAACCTCAAGGAAATTGCCGCCGTGCTGGGTGTGACCGAATCGCGGGTGTGCCAGTTGCACAGCCAGTCGATTGCCCGCCTGCGAGCCAAGATGCGCGCACACTGA
PROTEIN sequence
Length: 239
MYTAKGQLDRDAMIRQHVPLVRRIAHHMIAKLPPNVELDDLIQVGMMGLAEALSRYEVAQGVQFETFATQRIRGAMLDELREGDWMSRSSRKSQKDIEHAVHRLEQKLGRSPLESEIAGEMGMSLADYQNLLGKVRGTQLVYLEDMTHGNDDEDGFLDRHVADSAADPVELLRDQRLKTSLVNAIKTLPEREQHIMGMYYEHDMNLKEIAAVLGVTESRVCQLHSQSIARLRAKMRAH*