ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2539_curated_13

Organism: scnpilot_dereplicated_Acidovorax_1

near complete RP 40 / 55 BSCG 41 / 51 ASCG 11 / 38
Location: 11562..12806

Top 3 Functional Annotations

Value Algorithm Source
diaminopimelate decarboxylase (EC:4.1.1.20) similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 414.0
  • Bit_score: 817
  • Evalue 2.50e-234
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 414.0
  • Bit_score: 817
  • Evalue 1.10e-233
Diaminopimelate decarboxylase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3C4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 414.0
  • Bit_score: 817
  • Evalue 7.80e-234

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax sp. KKS102 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1245
ATGTCCAACCCTTTCTCCCCCGCCCAGCTCTGGGCCCTGGCCGACCAGTTTGGTACCCCGCTGTGGGTGTATGACGCGGCGACCATCCGCCAGCGCATTGCGCAGGTGTCCAATTTCGAGACCATCCGTTTTGCCCAAAAGGCCTGCTCCAACATCCACATCCTGAAGCTCATGCGCGAGCAGGGCGTGAAGGTGGATGCCGTTTCGCGCGGCGAGATCCTGCGTGCGCTGGCTGCGGGTTATGTGGCGGGTGGCGAGCCGTCGGAGATCGTCTTCGCCGCCGCCCTGTTCGACGCCGCCATGTTGGACTGCGTGGTGGAGCACTGCGTGCCCGTGAACGCAGGCTCCATCGACATGCTGCACCAGCTGGGCGCGCGTTCGCCCGGCCATGCGGTGTGGCTGCGCATCAACCCCGGCTTTGGCCACGGCCACAGCAACAAGACGAACACGGGTGGCGAGCACAGCAAACACGGCATCTGGCACACCGACCTGCCTGCGGCGCTGGATGCGATCCAGCAGCACGGCCTGAAGCTGGTGGGCCTGCACATGCACATCGGCTCGGGTGTGGATTACAGCCACCTGCAGGAAGTGTGTGGCGCCATGGTCAACCTGGTGCGCACGGCGCATGCGGCAGGGCATGACCTGCACGCCATCTCCGCCGGTGGTGGCCTGTCCATCCCCTACCGCAGCGGCGACCCCGTGGTCGACACGCAGCATTACCACGGCCTGTGGGACGCCGCGCGCCAGCAGGCCGAGGCCATCGTGGGCCACAAGCTCGGCCTGGAGATCGAGCCCGGCCGCTTCCTGGTTGCCGAATCGGGCGTGCTGCTGGGCCAGGTGCGCGCCACCAAGAACGCGGGCAACAACCACTTTGTGCTGGTTGATACCGGCTTCAACGAACTCATGCGCCCGTCCATGTACGGCAGCTACCACGCCATGAGCGTGCTGCGGCGTGATGGCTCCACTGCGGCCGAACACCCCACGGTGGTGGCGGGCCCGCTGTGCGAGTCGGGCGACGTGTTCACCCAGGGCGACGGCGGCGTGGTGCTGCCGCGCGACCTGCCCGCCGCGCAGGTGGGTGATCTGCTGGTGATCCACGACACCGGGGCGTACGGCGCCAGCATGTCCTCCAACTACAACACGCGGCCTTTGATTGCCGAGGTGCTCGTGGATGGCGGCCAGGCCCGCCTGATCCGCCGCCGCCAGACGGTGGACGAGCTGCTGGCGCTGGAGCTGGGGCTGTAA
PROTEIN sequence
Length: 415
MSNPFSPAQLWALADQFGTPLWVYDAATIRQRIAQVSNFETIRFAQKACSNIHILKLMREQGVKVDAVSRGEILRALAAGYVAGGEPSEIVFAAALFDAAMLDCVVEHCVPVNAGSIDMLHQLGARSPGHAVWLRINPGFGHGHSNKTNTGGEHSKHGIWHTDLPAALDAIQQHGLKLVGLHMHIGSGVDYSHLQEVCGAMVNLVRTAHAAGHDLHAISAGGGLSIPYRSGDPVVDTQHYHGLWDAARQQAEAIVGHKLGLEIEPGRFLVAESGVLLGQVRATKNAGNNHFVLVDTGFNELMRPSMYGSYHAMSVLRRDGSTAAEHPTVVAGPLCESGDVFTQGDGGVVLPRDLPAAQVGDLLVIHDTGAYGASMSSNYNTRPLIAEVLVDGGQARLIRRRQTVDELLALELGL*