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SCNpilot_expt_1000_bf_scaffold_3072_curated_25

Organism: scnpilot_dereplicated_Acidovorax_1

near complete RP 40 / 55 BSCG 41 / 51 ASCG 11 / 38
Location: comp(20455..21423)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 322.0
  • Bit_score: 626
  • Evalue 6.30e-177
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 322.0
  • Bit_score: 626
  • Evalue 2.80e-176
DNA-directed RNA polymerase subunit alpha n=3 Tax=Bacteria RepID=K0I9Y7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 322.0
  • Bit_score: 626
  • Evalue 2.00e-176

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Taxonomy

Acidovorax sp. KKS102 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
AAGGCGATCAATGTCGAGCAGCTTGGCCACAATCGTGCCAAGGTCGCACTGGAGCCGTTCGAGCGTGGGTACGGCCACACGCTGGGCAATGCCATCCGGCGCGTCCTGCTCTCGTCCATGGTGGGTTACGCAGCGACGGAAGTCACGATTGCAGGCGTTCTGCACGAGTATTCGTCCATCGACGGCGTTCAAGAGGACGTGGTCAACATCCTGTTGAACCTCAAGGGCGTGGTGTTCAAGCTCCACAACCGTGACGAAGTGACACTGAGCCTGCGCAAAGACGGCGAAGGTGTGGTCACTGCCCGTGATATCCAGACCCCTCACGACGTGGAAATCGTCAACCCGGATCACGTGATCGCCAACCTGTCTGCCGGCGGTAAGCTGGACATGCAGATCAAGGTAGAGAAGGGTCGCGGCTACGTGCCCGGTAACCTACGCCGCTATGCCGACGAATCGACCAAGTCGATTGGCCGCATTGTGCTGGACGCTTCGTTCTCTCCCGTGAAGCGCGTGAGCTACACCGTGGAAAGCGCCCGCGTGGAGCAGCGTACCGACCTGGATAAGCTGGTGGTCGAGATCGAAACCAACGGTGCGATCACTGCCGAAGACGCTGTGCGTGCATCGGCCAAGATCCTGGTGGAACAGCTGGCGGTATTTGCGCAGCTCGAAGGCGGCGAACTGGCTGCGTTCGATGCACCTGCAGGCCCACGTGGCAATGCGACGTTCGATCCGATCCTGCTGCGTCCCGTGGACGAGCTGGAACTGACCGTGCGTTCTGCCAACTGCTTGAAGGCGGAGAACATCTATTACATCGGTGACCTGATCCAGCGCACCGAGAACGAGCTGCTCAAGACGCCTAACCTGGGCCGCAAGTCGCTCAACGAAATCAAGGAAGTGCTGGCATCGCGCGGCCTCACCTTGGGCATGAAGCTTGAGAACTGGCCTCCAGCGGGTCTGGACAAGCGTTAA
PROTEIN sequence
Length: 323
KAINVEQLGHNRAKVALEPFERGYGHTLGNAIRRVLLSSMVGYAATEVTIAGVLHEYSSIDGVQEDVVNILLNLKGVVFKLHNRDEVTLSLRKDGEGVVTARDIQTPHDVEIVNPDHVIANLSAGGKLDMQIKVEKGRGYVPGNLRRYADESTKSIGRIVLDASFSPVKRVSYTVESARVEQRTDLDKLVVEIETNGAITAEDAVRASAKILVEQLAVFAQLEGGELAAFDAPAGPRGNATFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEIKEVLASRGLTLGMKLENWPPAGLDKR*