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SCNpilot_expt_1000_bf_scaffold_2669_curated_25

Organism: scnpilot_dereplicated_Acidovorax_1

near complete RP 40 / 55 BSCG 41 / 51 ASCG 11 / 38
Location: 27412..28023

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 200.0
  • Bit_score: 381
  • Evalue 7.60e-103
Transcription termination factor Rho n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXF1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 200.0
  • Bit_score: 381
  • Evalue 5.40e-103
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 96.0
  • Coverage: 200.0
  • Bit_score: 381
  • Evalue 1.70e-103

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Taxonomy

Acidovorax temperans → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGCACTTAAATGAACTCAAGGCACTGCACGTGTCTGAAGTCCTGAAGCAGGCCGAAGAACTCGAAATCGAAAACACGGGCCGCATGCGCAAGCAGGAGTTGATGTTTGCAATCATCAAGAAGCGCGCCAAGGCGGGCGAGCAGGTGTTTGCGGATGGTGTGCTGGAAATCCTGCCCGACGGTTTTGGCTTCCTGCGCAGCCCTGACACCAGCTTCACGGCCAGCACCGACGACATCTACATCAGCCCCAGCCAGGTGCGCCGCTTCAACCTGCACACCGGCGACATGATCGAAGGTGAAGTGCGCACACCCAAGGACGGCGAGCGCTACTTTGCCCTGACCAAGCTGGATTCGGTCAACGGCGGCCCGCCGGAGCAGAACAAGCACAAGGTGATGTTCGAGAACCTGACGCCCCTGTTCCCCAAGGAACAGATGCGCCTGGAGCGCGACATCAAGGGCGACGAGAACATCACCGGCCGCATCATCGACATCATCGCCCCCATCGGCCGTGGCCAGCGCGCGCTGATCGTGGCGCCGCCCAAGAGCGGCAAGACGGTGATGATGCAGCACATCGCCCCGCCATCACCGCCAACAACCCCGACGTGCACCTGA
PROTEIN sequence
Length: 204
MHLNELKALHVSEVLKQAEELEIENTGRMRKQELMFAIIKKRAKAGEQVFADGVLEILPDGFGFLRSPDTSFTASTDDIYISPSQVRRFNLHTGDMIEGEVRTPKDGERYFALTKLDSVNGGPPEQNKHKVMFENLTPLFPKEQMRLERDIKGDENITGRIIDIIAPIGRGQRALIVAPPKSGKTVMMQHIAPPSPPTTPTCT*