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SCNpilot_cont_750_p_scaffold_22286_curated_2

Organism: scnpilot_dereplicated_Acinetobacter_1

near complete RP 44 / 55 MC: 1 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(1665..1943)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1217704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobact similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 92.0
  • Bit_score: 185
  • Evalue 4.70e-44
rpoZ; DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 92.0
  • Bit_score: 178
  • Evalue 7.60e-43
DNA-directed RNA polymerase subunit omega n=3 Tax=Acinetobacter RepID=N8R1R7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 92.0
  • Bit_score: 185
  • Evalue 3.40e-44

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Taxonomy

Acinetobacter sp. NIPH 284 → Acinetobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 279
ATGGCACGTGTAACCGTTGAAGATTGTTTAGACCACGTAGATAACCGTTTTGAGTTAGTACTGGTAGCGAGTAAACGTGCACGCCAATTAGCACGTCAAGGTATGGAACCAACTGTAGAATGGGATAATGATAAACCAACAGTCGTTTCATTACGCGAAATTGCGGCAGGTCATGTCACTAAAGAAATTTTAAAACAACGCGATCAAGATTATCAGACTTCAAATCTTGATATGGTGTTGTCTACAAACTCATTAAATTTAGAAGGCTTCTCTTTCTAA
PROTEIN sequence
Length: 93
MARVTVEDCLDHVDNRFELVLVASKRARQLARQGMEPTVEWDNDKPTVVSLREIAAGHVTKEILKQRDQDYQTSNLDMVLSTNSLNLEGFSF*