ggKbase home page

SCNpilot_cont_750_p_scaffold_2405_curated_2

Organism: scnpilot_dereplicated_Acinetobacter_1

near complete RP 44 / 55 MC: 1 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 1441..2400

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Acinetobacter sp. NIPH 1859 RepID=N9RBA9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 319.0
  • Bit_score: 625
  • Evalue 2.60e-176
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1217705 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. ANC 3862.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 319.0
  • Bit_score: 625
  • Evalue 3.60e-176
DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 319.0
  • Bit_score: 613
  • Evalue 5.40e-173

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acinetobacter sp. ANC 3862 → Acinetobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGGATCGTAATCAATTCCGTACAACGTTCCCTGAACAAGAGTCAAATCCAGCTTGGTTAGATGAACAAATCGCGAAAGCCCCTGCTGAAACCAAAGCACATTTAGAAAAAGTGCGCCCTGACGTATTGGCATTCCAGCAGAAGATTGCCGATATTGAGAAAGACCTTGGTTTGAACGTAAAAGATATCAAAGATATCTCTAAACGTATGGCAGTTGGTGAAGCGAAAGCACGTCGTGCCAAGAAAGAAATGGTTGAAGCAAACTTACGTTTGGTTATTTCGATTGCGAAGAAATACACCAACCGTGGCTTACAGTTCCTTGATTTGATTCAAGAAGGTAACATTGGTTTGATGAAGGCTGTAGACAAGTTTGAATATCGTCGTGGTTATAAATTCTCGACGTATGCAACTTGGTGGATTCGTCAGGCGATTACTCGTTCAATTGCCGATCAAGCGCGTACTATTCGTATTCCAGTCCACATGATTGAAACGATTAACAAGATCAATCGTGTATCACGTCAACTTCTTCAAGAAATGGGACGTGAACCGACACCTGAAGAATTAGGTGAACGTCTTGAAATGGACGAGGTTAAAGTTCGTAAAGTACTTAAAATCGCAAAAGAACCGATTTCGATGGAAACACCGATCGGTGATGATGAAGATTCGCATCTTGGTGACTTCATTGAGGATTCAAACATCACATCTCCAGTCGATGCTGCGACCTCAGAAGGTTTAAAAGAAGCGACACGTGAAGTGCTTGAAAACTTAACAGAACGTGAAGCTAAAGTATTAAAAATGCGTTTTGGTATCGATATGCCAACTGACCATACTTTAGAAGAAGTGGGTAAACAGTTTGACGTAACACGTGAACGTATCCGTCAGATTGAAGCGAAAGCGTTACGTAAACTTCGCCACCCTTCTCGCTCTGAACATTTACGTTCATTCTTGGAAAATGACTGA
PROTEIN sequence
Length: 320
MDRNQFRTTFPEQESNPAWLDEQIAKAPAETKAHLEKVRPDVLAFQQKIADIEKDLGLNVKDIKDISKRMAVGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKINRVSRQLLQEMGREPTPEELGERLEMDEVKVRKVLKIAKEPISMETPIGDDEDSHLGDFIEDSNITSPVDAATSEGLKEATREVLENLTEREAKVLKMRFGIDMPTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEHLRSFLEND*