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SCNpilot_cont_1000_bf_scaffold_434_curated_20

Organism: scnpilot_dereplicated_Actinobacteria_1

near complete RP 50 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: 21499..22908

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Amycolatopsis methanolica RepID=UPI0003782AC8 similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 470.0
  • Bit_score: 307
  • Evalue 3.00e-80
Putative RNA-binding protein containing a PIN domain protein {ECO:0000313|EMBL:AIJ25211.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 470.0
  • Bit_score: 307
  • Evalue 4.20e-80
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 476.0
  • Bit_score: 301
  • Evalue 5.10e-79

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Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
ATGACGAACGTGTATGACGCTGTTCCGCGCGATGCCGTTCCGGACCGTTCTGCACCGGAGACGCCGCCTCCCGACCAGCCGACCGGGCAACCGGACCCGCCGCCGGCCGTGACATGGGCGGACCTCCCCGAGACGGTGCGCACCGCGGCGATCGGTGCCGCGGCCCGCGTCATCGGAACGCTGCCCGCCGATCGGGTGCCGCACGCCTTGGCACAGGTCGCCCGGTTCGTTGACGCCAAACGCGCCAAGAGCGGGGCGGCACCGATCGCTCGCGCGTTGGAGCACGACGCCGGGTTCCGCGCCCTGGTCGCGGAAAGCCTCCCGGCGGACTTCGGCCGAGCGGACGCGGACCCGGCCGCCGCGGCGGCGCGGTCCTTCCTGCGGCACCTCCCGGATACCCGGCTCCTGCTCGCGGACGCCGCCCGCGCGGACGAGGTGGCGAGCCTCCGCGCGCAGGTCGCTGGGCTGACAGCGACCGTCGAGGGCCTGACGACCCAGCTTGCGAATACCGCCCGCGGCCGTGGCAAAGCCGGTTCTGCGGCGCCGGCGGTATCTGACGGGAAGTCCGGGAGGCAGCCCGGGGCGAAGGCCGATTCCGCCGACCAGGATGAGATCGCCAAATTGCGCGCGCGCCTGCGCCAGCAGGGCACCCGGGTTCGCGAGGCGCAATTATCGGCGGCCGACTCGGTGCGGCTCGCCGACGCGGAGCGGGACGAGGCCGTGGCGCAACTCGAGCGAGAACGCGCCAACGCCGACGCCTGGCGGCTCAAAGCGGAGCAGGAGGCCCGCCAGGCACAGACGGCGCGGCAGGCACTCGATCGGGCGCGCGCCGAGCTCAGCCGCGACCGGGCGGACGGTGATCGGCGCATCGAACTGCTGCTGGACACCCTCGTCGACGCCGCCGCGGGGCTGAGGCGGGAGTGGCGCCTGGCGACCGGAGGAGCGGATCCGGCCGACGTCGTGGTTCGGGACCTGCCGGCCGCCGACCCGCGGCCGCGGCGGCAAGCCGATGCCGCGCTGCTCCTGCAGTGGCTGGGTCTCCCCAGTGCGCATGTGATCGTCGACGGCTACAACGTGACGAAGACGGGATATCCGGATCTCACCCTCGCCGACCAGCGGGACCGGCTGATCCGCGCGCTCGGCGCTCTCGCGGCGCGTACCGGCGCCGACATCACCGTCGTTTTCGACGGAGCCGCGGTGGTCGCGGCGCCGACGTCGACCAGGGATGTACGGGTGGTCTTCTCGCCGCCGGGGGTGATCGCCGATGACGTCATTCGCCGGCTGGCCGCCGCGGAACCCGTCGGCAGGGTGGTGGTTGTCGTGACATCCGATCGTGAGGTGGTGGACGGTGTCCGCCGTTCGGGCGCACGAACCGCGCCGTCGCAGGTCCTGCTCGAGGTGCTCGCGTGA
PROTEIN sequence
Length: 470
MTNVYDAVPRDAVPDRSAPETPPPDQPTGQPDPPPAVTWADLPETVRTAAIGAAARVIGTLPADRVPHALAQVARFVDAKRAKSGAAPIARALEHDAGFRALVAESLPADFGRADADPAAAAARSFLRHLPDTRLLLADAARADEVASLRAQVAGLTATVEGLTTQLANTARGRGKAGSAAPAVSDGKSGRQPGAKADSADQDEIAKLRARLRQQGTRVREAQLSAADSVRLADAERDEAVAQLERERANADAWRLKAEQEARQAQTARQALDRARAELSRDRADGDRRIELLLDTLVDAAAGLRREWRLATGGADPADVVVRDLPAADPRPRRQADAALLLQWLGLPSAHVIVDGYNVTKTGYPDLTLADQRDRLIRALGALAARTGADITVVFDGAAVVAAPTSTRDVRVVFSPPGVIADDVIRRLAAAEPVGRVVVVVTSDREVVDGVRRSGARTAPSQVLLEVLA*