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SCNpilot_cont_1000_bf_scaffold_289_curated_7

Organism: scnpilot_dereplicated_Actinobacteria_1

near complete RP 50 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: comp(5586..6014)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=414996 species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 141.0
  • Bit_score: 163
  • Evalue 3.00e-37
Ribonuclease VapC n=2 Tax=Mycobacterium canettii RepID=G0TI58_MYCCP similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 142.0
  • Bit_score: 161
  • Evalue 4.70e-37
Conserved protein of unknown function with PIN domain similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 142.0
  • Bit_score: 161
  • Evalue 1.50e-37

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Taxonomy

Actinopolyspora erythraea → Actinopolyspora → Actinopolysporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 429
GTGCGGGCGTTGCTCGACGTCAGCACTTTGCTCGCGCTCGCGGACGCCAACCACACCCACCACGGGCGCGCCCGCCGTTGGTTCCGTGAAGTAGGCCGCGCCGGATGGGCGTCCTGCGCCATCACTGAGAACGGTTTCGTCCGGATCTTCAGCCAGCCTGCCTACCCCGCGATGGCATCGTCGCGGGCGGCCGTCGACGCGCTCGAAGACGCGTGTCGCGCCGGCGATCACGAATACTGGCCCTGCGATGTCAGCCTGCGTGACCCGGCCTCGGTGCATCGAGCGAATCTGCTCAGCCACAAACAGGTGACCGATGTCTACTTGCTCGCTCTCGCGGTCGCGCACGGTGGCCGGCTCGTCACCTTCGATCGCGGCATCACGCTGGCGGCCGTGCCCGGCGCCACCGCCGAGCACCTCGTCGTGCTGTAG
PROTEIN sequence
Length: 143
VRALLDVSTLLALADANHTHHGRARRWFREVGRAGWASCAITENGFVRIFSQPAYPAMASSRAAVDALEDACRAGDHEYWPCDVSLRDPASVHRANLLSHKQVTDVYLLALAVAHGGRLVTFDRGITLAAVPGATAEHLVVL*