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SCNpilot_cont_1000_bf_scaffold_312_curated_22

Organism: scnpilot_dereplicated_Actinobacteria_1

near complete RP 50 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: 20113..21891

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B454F5 similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 589.0
  • Bit_score: 940
  • Evalue 8.80e-271
Uncharacterized protein {ECO:0000313|EMBL:CEI48400.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 590.0
  • Bit_score: 936
  • Evalue 1.40e-269
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 590.0
  • Bit_score: 883
  • Evalue 4.00e-254

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Taxonomy

Propionibacterium freudenreichii → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1779
GTGAGCCAGCCGCCGCCACGGGGGCCGCGCGGAGACGAGCTGACCAACCTGGCCCTCGGCGCCCTGGCCGCCGGGGTGGTCCTCGCTGCTGTGCTGCGCGGCGCCGGGTCCGTCGCGGCGTGGATCACCGGCCTGCGGCAGCCTGCCGGCGGGATCGCGACCGGGCTCGGCGTCCTGACCCATCCCGGCCAACCGGCGATCCCGCTCGACGCGCCCGGGCTGAACCCGGTCGCGTACTGGACTGCCGCCGCCGTGCTCATCCTGACCGGCACGGCGGTGGTGTGGTGGGTGTGGCGGCTGGTCCGCGACCACGGCCGGCAGACCAGCACCGACCCCTACCGGATCGCCGGGGTCGCCACCCGCGGCGAGGTCGCCAAGACGGCCTCCGAACACGCGCTGCTCCACCGGGCAGCCCATCTACGCCCATCGCTGGACAAGCCACACGCTGCCGATGTCGGGTACCGGCTCGGGGTCTCGCGCGGCAAGACCGTGTGGGCCTCGGTGGAAGACTCCATCCTGCTCATCGGCCCGCCGCGTTCCGGCAAGGGGCTGCACGTGGTCATCCCCATGATCCTGGACGCGCCCGGCGCCGTGGTCACCACCAGCACGCGGCCGGACAACCTCACCGCGACCCTGCGTGCCCGGCAGAAGGCCGGGCCGGTCGCGGTGTTCGACCCCCAGCATTTGGCCGAGGGCGTTCCGACCGGGCTGCGGTGGTCACCGATCCGCGGATGCGACGATCCGCTGACCGCGATGATCCGCGCGACCGGCCTCGCCGCCGCGACCGGCCTGTCCTCCGGTGGCGTGGACTCGGGAGGGTTTTGGGAGGGCAAGACTCGCACCGCGCTGCAAGCACTCCTGCACGCCGCCGCGCTGGACAACCGGCCGCCCGCCGAGCTGTTCCGCTGGACCCTCGATCCCTCCGCGGCCTCCGATGCGGTCGCGATCCTGACCAACCACCCCGCCGCGGCGACCGGCTGGGCCGACTCCCTCGCGTCGATGATCGACTCCGACCCACGCACCCGCGACTCGATCTGGCAAGGCGTCTCCCTGGCCCTCGGCGCGCTAGCCGACCCCCGCGTCCTGGACGCCGTATCCCCACAACCGGGTGAGGACTTCGACCCCGAACAGTTCCTCACCGAACACGGGACGCTCTACCTCTTGGCGACCGGAGCCGGCGCCGGGGCCTCCGCGGCGCTGGTCGCCGCGTTCGTGGAAGACCTCATCGAGGCCGCCCGCCGGCTCGCCGCACGCTCGCCCGGTGCGCGGCTGGACCCGCCGCTGCTGCTGGCCCTCGATGAGATCGCCAACCTCGCGCCCCTGCCCTCGTTGCCGACGCTGATGGCCGAAGGCGGCGGCACCGGCCTGACCTGTGTCCCGGTCTTGCAGTCCCTGGCCCAAGCCCGAGAGAAATGGTCCGACAACGCCGCCGGCGCGATCTGGGACGCCAGCATCGTCAAGATCATCCTCGGCGGCGCGTCCAACTCCCGTGACCTTCAAGACCTAACCACCCTCATCGGGGAACGCGACGAATACACCGACTCCACCACCATCGGGGACTACGGGTCACGCTCCGCGCAACGCTCGACCCGGCGGGTGCCGATCCTGCCCCCCGACCGGATCAGAACCCTTCCGTTCGGCACCGCACTCACCCTGCTACGCGCCGCGCCACCCATCGTCACCAACCTGCGGCCCTGGACCGCGCGAGACGACGCCGGCCAGTTGAAGACCGACCGCGCACACATCGAGGCGCTGCTGCGCCGCACAGCGGACTCCTGA
PROTEIN sequence
Length: 593
VSQPPPRGPRGDELTNLALGALAAGVVLAAVLRGAGSVAAWITGLRQPAGGIATGLGVLTHPGQPAIPLDAPGLNPVAYWTAAAVLILTGTAVVWWVWRLVRDHGRQTSTDPYRIAGVATRGEVAKTASEHALLHRAAHLRPSLDKPHAADVGYRLGVSRGKTVWASVEDSILLIGPPRSGKGLHVVIPMILDAPGAVVTTSTRPDNLTATLRARQKAGPVAVFDPQHLAEGVPTGLRWSPIRGCDDPLTAMIRATGLAAATGLSSGGVDSGGFWEGKTRTALQALLHAAALDNRPPAELFRWTLDPSAASDAVAILTNHPAAATGWADSLASMIDSDPRTRDSIWQGVSLALGALADPRVLDAVSPQPGEDFDPEQFLTEHGTLYLLATGAGAGASAALVAAFVEDLIEAARRLAARSPGARLDPPLLLALDEIANLAPLPSLPTLMAEGGGTGLTCVPVLQSLAQAREKWSDNAAGAIWDASIVKIILGGASNSRDLQDLTTLIGERDEYTDSTTIGDYGSRSAQRSTRRVPILPPDRIRTLPFGTALTLLRAAPPIVTNLRPWTARDDAGQLKTDRAHIEALLRRTADS*