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SCNpilot_cont_750_p_scaffold_176_curated_68

Organism: scnpilot_dereplicated_Aeromonas_1

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38 MC: 3
Location: 69016..70872

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=12 Tax=Aeromonas RepID=K2HDX1_AERME similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 618.0
  • Bit_score: 1175
  • Evalue 0.0
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 618.0
  • Bit_score: 1184
  • Evalue 0.0
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 618.0
  • Bit_score: 1170
  • Evalue 0.0

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Taxonomy

Aeromonas hydrophila → Aeromonas → Aeromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1857
ATGGAGCAAACCCCGCAGTCTCAGCTTAAACTCCTCGTTGCCAAAGGTAAAGAACAGGGCTACCTGACCTATGCCGAGGTGAACGATCACCTCCCGCAAGACATTGTCGATTCAGACCAGATCGAAGACATCATCCAGATGATCAACGATATGGGCATTCAAGTGGTTGAAAACGCTCCGGATGCCGATGACCTTATCATGGCTGAAGGTGGTACCGCCGATGAGGACGCTGCCGAAGCAGCGGCCCAGGCTCTGGCATCTGTTGAATCTGAGATTGGTCGCACGACCGATCCCGTCCGCATGTACATGCGGGAAATGGGTACCGTCGAACTGCTGACCCGCGAAGGCGAGATCGACATCGCCAAGCGGATTGAAGACGGTATCAACCAGGTACAAAGCTCCGTCGCCGAGTACCCTGAAGCCATCACCTATCTGCTCGAACAGTACGACAAGTACGAAGCCGAGCAGCTTCGCCTGTCCGACATCATCTCCGGCTTCATCGATCCGAACGAAGTGGATGACGTGGCACCGACCGCCACTCATATCGGCTCCGAGCTCAGCGAGGACGACCTCGCCGACGAAGACGAAGATGAGGACGAAGACGAAGACGAAGACGGTGACAACTCCGACGATGATGGCGACGGTGGCCCGGATCCGGAAGTCGCTCGCGAGAAATTCGGCGAACTGCGTGCCCAGTACGAGGTGACTCGTCTCTCCATTCAGCAGAATGGCCGTGCCCACGACGACACCCAGAATGCCATCGCCCAGCTGGCCGATGTCTTCCGTCAATTCCGCCTGATGCCCAAGCAGTTCGATCGCCTGGTCAACAACATGCGGGAGATGATGGAGCGTGTCCGCGTGCAGGAACGCATCATCATGAAGCTCTGCGTTGAGCAGGCCAAGATGCCGAAGAAGACCTTCGTCGCGGCCTTCACCAACAACGAGTGCGAAACTGCCTGGTTCGAATACCAGAAGCAGGCCGGCAAGGCGTGGTCTCCCCGCCTGCTCGAGATGGACGAAGAAGTACTGCGTTCCATCGGCAAGCTGCAGCAGATCGAAGAAGAGACCGGTCTGTCCATCGCCCAGATCAAGGACATCAACCGCCGCATGAGCATTGGTGAGGCCAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAGGCCAACTTGCGTCTGGTTATCTCCATCGCCAAGAAGTACACCAACCGCGGTCTGCAGTTCCTGGATCTGATCCAGGAGGGCAACATCGGTCTGATGAAGGCGGTCGACAAGTTCGAATATCGTCGCGGCTACAAGTTCTCGACCTATGCCACCTGGTGGATCCGTCAGGCCATTACCCGCTCCATCGCGGATCAGGCCCGTACCATCCGTATCCCGGTGCACATGATCGAGACCATCAACAAGCTCAACCGTATCTCCCGCCAGATGCTGCAGGAGATGGGTCGTGAACCGAACCCGGAAGAGCTGGCCATGCGCATGGGCATGCCGGAAGACAAGATCCGCAAGGTACTGAAAATCGCCAAGGAGCCCATCTCCATGGAGACGCCCATCGGTGATGATGAAGACTCCCACTTGGGCGACTTCATCGAAGATACCACCCTGGCTCTGCCAGCGGATGCGGCCACCAGCGAGAGCCTGCGCAACGCGACCCGCGAAGTGCTGGCCGGGCTGACCGCACGGGAAGCCAAGGTACTGCGCATGCGCTTCGGTATCGACATGAACACCGACCACACCCTCGAGGAAGTGGGCAAGCAGTTCGACGTCACTCGTGAGCGTATCCGTCAGATCGAAGCCAAGGCCCTGCGCAAACTGCGCCATCCGAGCCGCTCGGAAGTGCTGCGCAGCTTCCTGGACGAGTAG
PROTEIN sequence
Length: 619
MEQTPQSQLKLLVAKGKEQGYLTYAEVNDHLPQDIVDSDQIEDIIQMINDMGIQVVENAPDADDLIMAEGGTADEDAAEAAAQALASVESEIGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQSSVAEYPEAITYLLEQYDKYEAEQLRLSDIISGFIDPNEVDDVAPTATHIGSELSEDDLADEDEDEDEDEDEDGDNSDDDGDGGPDPEVAREKFGELRAQYEVTRLSIQQNGRAHDDTQNAIAQLADVFRQFRLMPKQFDRLVNNMREMMERVRVQERIIMKLCVEQAKMPKKTFVAAFTNNECETAWFEYQKQAGKAWSPRLLEMDEEVLRSIGKLQQIEEETGLSIAQIKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPNPEELAMRMGMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLALPADAATSESLRNATREVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDE*