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SCNpilot_cont_750_p_scaffold_768_curated_34

Organism: scnpilot_dereplicated_Aeromonas_1

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38 MC: 3
Location: 38112..38387

Top 3 Functional Annotations

Value Algorithm Source
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6); K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 91.0
  • Bit_score: 175
  • Evalue 1.10e-41
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1073383 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas veroni similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 91.0
  • Bit_score: 175
  • Evalue 4.90e-41
DNA-directed RNA polymerase subunit omega n=15 Tax=Bacteria RepID=RPOZ_AERHH similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 91.0
  • Bit_score: 175
  • Evalue 3.50e-41

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Taxonomy

Aeromonas veronii → Aeromonas → Aeromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 276
ATGGCCCGCGTTACTGTAGAAGATGCTGTAAAACAGGTAGGTAACCGTTTTGACCTGGTGCTGGTCGCCGCGCGCCGCGCTCGTCAAATCGCGGTACAAGGCAAGGATCCCCTGGTCGACGAAGAGAACGACAAGCCGACCGTGATCGCCCTGCGCGAGATCGAACTGGGTCTGGTCAACAACCAGGTGATGGATACTCAGGACCGCTACGAGCAGCAAGAGCAGGAAGCCGCCGAGCTGGCTGCCGTTGCTGCCATCGCAGAAGGTCGCGGCTAA
PROTEIN sequence
Length: 92
MARVTVEDAVKQVGNRFDLVLVAARRARQIAVQGKDPLVDEENDKPTVIALREIELGLVNNQVMDTQDRYEQQEQEAAELAAVAAIAEGRG*