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SCNpilot_expt_1000_bf_scaffold_1023_curated_22

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(20722..21474)

Top 3 Functional Annotations

Value Algorithm Source
Phosphonate metabolism transcriptional regulator PhnF n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PA43_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 233.0
  • Bit_score: 242
  • Evalue 6.30e-61
Transcriptional regulator {ECO:0000313|EMBL:KJC46623.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 233.0
  • Bit_score: 242
  • Evalue 5.20e-61
GntR family transcriptional regulator; K02043 GntR family transcriptional regulator, phosphonate transport system regulatory protein similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 235.0
  • Bit_score: 240
  • Evalue 5.80e-61

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Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 753
ATGCTCACGCGATCACCGCGCCGCTCCGGAAGAAATCATTTGTTAGACCGCGGCGTCATGCTGTGGCGCTGTATTGCCGATGATTACGAGCAGATGATTCTCGTCGGCAAACATGAGAACGGCGCGCGCCTGCCGCCCGAGGCCGAAATCGCCACGCGCTACGGCGTGAATCGGCATACTGTACGCCGGGCGATCGCCGAACTGGCGGCGCGCGGTCTGGTTCGTACCGAGCGCGGCAGTGGAACTTATGTCCGAACCGATAAACTCGATTATCGCATCGGCCGCATCACACGCTTTTCCGAGATCATGGCAGCCTCCGGCCACGAAGCGGAGGGGCGCTTACAAAGTCATCGGTTCGAAGACGCAACCGATGAGGTGGCGGCGCGGCTGGGACTCAATCCCGGCGCTCAGGTGGTGCGGCTTGATATTGTTCGGTCGGCGGATCGCGTGCCGATCTCCGTCGCCTCGACCTGGCTCTGCGCAGAACGCTTTCACGATGCGGCGCGTGTTTTCCGCCAGACTCGTTCGGTGACCCGTATGCTGGAGCATTACGGGGTTGGCGAGTTTCGCCGCAAATGGACGCGCATCAGCGCGGCGTTCGCCGATGCCGTTGATGCCGGACGGTTGCGCTTGTCCGTGCATCGGCCGGTGCTGGTGGTGGAAAGCGTGGATTGCTCCACCGGCGATCAGCCGCTGCTGACCACCCGTGGCCGATTTTCTGCCGACCGCATCGCTCTGACGGTTGAAAGCTAG
PROTEIN sequence
Length: 251
MLTRSPRRSGRNHLLDRGVMLWRCIADDYEQMILVGKHENGARLPPEAEIATRYGVNRHTVRRAIAELAARGLVRTERGSGTYVRTDKLDYRIGRITRFSEIMAASGHEAEGRLQSHRFEDATDEVAARLGLNPGAQVVRLDIVRSADRVPISVASTWLCAERFHDAARVFRQTRSVTRMLEHYGVGEFRRKWTRISAAFADAVDAGRLRLSVHRPVLVVESVDCSTGDQPLLTTRGRFSADRIALTVES*