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SCNpilot_expt_1000_bf_scaffold_1023_curated_32

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(28598..29773)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 391.0
  • Bit_score: 743
  • Evalue 1.10e-211
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 393.0
  • Bit_score: 663
  • Evalue 5.60e-188
  • rbh
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PNM6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 391.0
  • Bit_score: 743
  • Evalue 8.00e-212

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1176
ATGCTCAACAGCCTCGACCTCGAAGGTCGCCCGGAAGATACCCGGGTCGTCGTCGCCATGTCCGGTGGCGTCGATTCCTCGGCGACGGCTGCGCTGCTCAAGGCGGAAGGCTATGACGTGGTCGGCATCACGCTGCAGCTTTACGATCATGGCGCGGCGACCCATCGCAAGGGCGCATGCTGTGCGGGGCAGGACATTCACGACGCGCGCGACGTCGCGGCGCGGATCGGTATTCCGCATTACGTGCTCGACTACGAAAGCCGTTTCCGCGAGTCGGTGATCGAAAGCTTCGCCGAAAGCTACGTGCATGGTGAAACACCCGTGCCGTGCATCGAGTGCAATCGCACGGTCAAGTTTCGCGACCTTTTGTCGACCGCGCGCGAACTCGGCGCCAAGGCGCTTGCCACCGGACATTATGTCGCATCGCGCCGCCTCGATGACGGCTCGCGCGCGCTGGTCTGCGCGGCGGATGCCGATCGCGACCAGAGCTATTTCCTGTTCGCCACCACGCAGGACCAGCTCGCCGACGTGCGCTTTCCGCTCGGCGACATGACCAAGGCGCAGACTCGCGAACTGGCGCGGCGCTTCGGACTGTCGGTGGCCGACAAGCACGACAGCCAGGACATCTGCTTCGTGCCGACCGGCCGCTACACCGACGTGATCGAACGGCTGAAGCCGAATGCGATGGAGCCGGGCGATATCGTCGATCTGGAAGGCCGCGTGCTCGGCCGCCATCAGGGCATTATCGGATACACCATCGGCCAGCGCCGCGGTCTCGGCATCGCCGCGCACGCGCCGCTCTATGTGGTGCATCTCGATGCGGAGACGCGCCGCGTGGTGGTGGGCCCACGCGAGGCGCTGAACGTGCGCCGGATCATGCTGCGCGACGTCAACTGGATCGGCGGCGGCGACCTCGATCAGGCGGTCGGCGATGGCCTCGAAATGTTCGTCAAGGTGCGCTCCACCCGTGCGGCACAGCCCGCGTGGTTGCGCCGTGTCGGTGGCGGCTATGAAGTCGAACTGGCGGACGGCGAAGAGGGCGTGTCGCCCGGACAGGCTTGCGTGTTCTATGATGCGCCCGCCGGACAGGCGCGGGTGCTTGGCGGTGGCTTCATCAGCGCGGCACAACGCAGCCTGCGGTCGGTGCCGGCGCACCGCGAAGCTCTTGCCGGATAA
PROTEIN sequence
Length: 392
MLNSLDLEGRPEDTRVVVAMSGGVDSSATAALLKAEGYDVVGITLQLYDHGAATHRKGACCAGQDIHDARDVAARIGIPHYVLDYESRFRESVIESFAESYVHGETPVPCIECNRTVKFRDLLSTARELGAKALATGHYVASRRLDDGSRALVCAADADRDQSYFLFATTQDQLADVRFPLGDMTKAQTRELARRFGLSVADKHDSQDICFVPTGRYTDVIERLKPNAMEPGDIVDLEGRVLGRHQGIIGYTIGQRRGLGIAAHAPLYVVHLDAETRRVVVGPREALNVRRIMLRDVNWIGGGDLDQAVGDGLEMFVKVRSTRAAQPAWLRRVGGGYEVELADGEEGVSPGQACVFYDAPAGQARVLGGGFISAAQRSLRSVPAHREALAG*