ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3242_curated_6

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(6863..8422)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PA94_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 520.0
  • Bit_score: 866
  • Evalue 1.40e-248
Uncharacterized protein {ECO:0000313|EMBL:EKS36535.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 520.0
  • Bit_score: 866
  • Evalue 2.00e-248
glycine betaine ABC transporter substrate-binding protein; K05845 osmoprotectant transport system substrate-binding protein; K05846 osmoprotectant transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 514.0
  • Bit_score: 772
  • Evalue 6.70e-221

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1560
ATGATGTTGACGGTCGATCCCCGCTGGAACGATGCGCTGACGCGCCTGCCGGATTATCTCGGCAGCCATGTGCGTGTCAGCCTCACCGCACTCGCGCTGGGTCTCGTCGTCAGTTTTCCTCTTGCGCTCATGGTAAAGCGGCGGCCGCTGGCACGAGACATCGTGCTCGGCATCGCGAGCATCGTGCAGACCGTGCCAGGCCTGGCACTGCTCGCGCTGTTCTATCCGCTGCTGCTGGCGCTGGCGGGCTTGTCGCTGAACTGGTTCGGGGTTGGATTTTCCGCGTTCGGCTTTCTGCCGTCGGTGCTTGCGCTGGCGCTCTACAGCATGCTGCCCGTCTTGCGAAACACCATCACTGGACTGCAAGGTATCGATCCTGCCATCATCGAAGCCGCCGAAGGCGTCGGCATGACGCCGCGGCAATCGCTGACCATGGTCGAACTGCCGCTGGCGCTGCCGGTGATCATGGCGGGTGTCCGGACGGCCGCCGTCTGGGTGATCGGCACCGCGACACTGTCGACTCCCATCGGCCAGACCAGCCTCGGTAACTACATCTTCGCCGGACTGCAGACCCAGAACTGGGTGTTCGTGCTGTTCGGCTGCGCCGCCGCTGCCGCGCTGGCACTGGCGGTCGATCAGCTACTGGCGCTGATCGAAAACGGCGTAAAGCGAAATAGCCGCATGCGCATCGCCGTCGGCTGCATCGGACTTGCGGCACTCGTCGCGGCGACGCTGATGCCATCGCTTGCGCGCGCCCGAACCAGCTATATCGTCGGCGCAAAGACCTTCACCGAACAGTACGTCCTCTCCTCACTGATCGCCCAGCGCTTGCAGGCCGTGGGACTATCCGCAACGCCGCGTGAAGGTCTCGGCTCCGCGGTAATCTTCGAGGCGCTCGCGGCCAACGATATCGATGTCTATGTCGATTATTCCGGCACATTGTGGGTCAATCAATTCAAGCGCGAGGTCGAGCCCCGCGCCAAGCTGCTGGACGACCTGAAAGCGACGCTCCGAGATCGATATGGCATTACCCAGCTCGGCGATCTCGGATTCGAGAATGCCTACGCGCTGGTGATGCCGCGCAAGCGCGCCGAAGCGCTGGGCATCCACACCATCACCGATCTCGTCACCCATGCCGCAAGCATGTCGATCGCAGGCGACTATGAATTCTTTTCGCGTCCGGAATGGGCCGCGCTGAAATCCGCCTATGGCCTCTCCTTCCGTCAGCAGCGGCAGATGCAGCCGGATTTCATGTACGCCGCGGCGGCGTCCGGCGATGTGGATGTGATCGCGGGCTACACCAGCGACGGGCTGATCGCGAAATACGATCTGGTCGTACTCAGCGATCCGAAATCCGCTATTCCGCCCTATGACGCGATCGTGCTGCTGTCGCCGAAACGCGCCGACGATAAGAAGCTGCGCGACGCCCTGCAGCCCCTGCTCGGCCGGATCGATATCGCTGCGATGCGCGAGGCCAATCTGCGCGCGGCGGGCGGCGACAACGCGAGTTCTCCCGACGCTGTTGCGCGGTGGCTGTGGGAGCGCATTTCAAAGCGCTAG
PROTEIN sequence
Length: 520
MMLTVDPRWNDALTRLPDYLGSHVRVSLTALALGLVVSFPLALMVKRRPLARDIVLGIASIVQTVPGLALLALFYPLLLALAGLSLNWFGVGFSAFGFLPSVLALALYSMLPVLRNTITGLQGIDPAIIEAAEGVGMTPRQSLTMVELPLALPVIMAGVRTAAVWVIGTATLSTPIGQTSLGNYIFAGLQTQNWVFVLFGCAAAAALALAVDQLLALIENGVKRNSRMRIAVGCIGLAALVAATLMPSLARARTSYIVGAKTFTEQYVLSSLIAQRLQAVGLSATPREGLGSAVIFEALAANDIDVYVDYSGTLWVNQFKREVEPRAKLLDDLKATLRDRYGITQLGDLGFENAYALVMPRKRAEALGIHTITDLVTHAASMSIAGDYEFFSRPEWAALKSAYGLSFRQQRQMQPDFMYAAAASGDVDVIAGYTSDGLIAKYDLVVLSDPKSAIPPYDAIVLLSPKRADDKKLRDALQPLLGRIDIAAMREANLRAAGGDNASSPDAVARWLWERISKR*