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SCNpilot_expt_1000_bf_scaffold_1505_curated_11

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(10072..10863)

Top 3 Functional Annotations

Value Algorithm Source
5-carboxymethyl-2-hydroxymuconate isomerase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036A5A86 similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 263.0
  • Bit_score: 450
  • Evalue 9.40e-124
Sulfonate transport system substrate-binding protein {ECO:0000313|EMBL:ERF85341.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 263.0
  • Bit_score: 450
  • Evalue 2.20e-123
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 263.0
  • Bit_score: 433
  • Evalue 3.70e-119

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Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGACTGAACTCAATCGCAGACATATTCTTGCAGGCGGTGCGGTGGCCGTCGCGGGCGCGGCTGCTTTCGGCGACAGCGCCGAAGCGAAAGTCGGCGCGACGCCGATTTTCCCGGTTGCGCAAACCACCATTCCGGTTGTCGGATTGAAAGAAGTCTTTCCGGTGCGCCGTATTTATTGTATCGGCCGCAACTATGCCGCCCATGCGATCGAGCGTGGCTCGGATCCGACACGCGAACCGCCGTTCTTCTTTCAGAAGCCGACGGATGCCATTCAGGTCGTCGCCATCGGTACGGTTGCGGATCATCCGTATCCGACGCTGACCAAGAATTATCACCACGAGGTCGAACTGGTCGCCGCGTTGAAATCCGGTGGCAAGAATATCCCCGCCGATAAGGCGCTTGATCATGTCTACGGTTACGCGCTTGGCCTCGATATGACGCGGCGCGACCTGCAGAATGCCATGGGGGCCGCAAAGAAACCATGGGAAATCGGCAAGAGCTTCGATCACTCGGCAGTGCTCGGGCCGATTCATCCGGCGACCAAGACAGGCCATTTCACCAAGGGCGCGATCTCGCTGGCGGTGAACGGGACCGTCAGGCAGAACTCCGATCTCACCAAGATGATCTGGAGCGTGGCTGAACAGATATCGAAATTGTCCGAAGCATTCGAGCTCAAGGCCGGCGATATCATCTATTCCGGCACGCCGGAGAATGTTGGTCCGGTGGTGAAGGGTGACATCCTGCTCTGCAAGCTGGAAGGCCTGCCGGACATGTCGATCAAGATCGTCTGA
PROTEIN sequence
Length: 264
MTELNRRHILAGGAVAVAGAAAFGDSAEAKVGATPIFPVAQTTIPVVGLKEVFPVRRIYCIGRNYAAHAIERGSDPTREPPFFFQKPTDAIQVVAIGTVADHPYPTLTKNYHHEVELVAALKSGGKNIPADKALDHVYGYALGLDMTRRDLQNAMGAAKKPWEIGKSFDHSAVLGPIHPATKTGHFTKGAISLAVNGTVRQNSDLTKMIWSVAEQISKLSEAFELKAGDIIYSGTPENVGPVVKGDILLCKLEGLPDMSIKIV*