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SCNpilot_expt_1000_bf_scaffold_1505_curated_20

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(18545..18847)

Top 3 Functional Annotations

Value Algorithm Source
preprotein translocase subunit SecF n=1 Tax=Afipia birgiae RepID=UPI0002FEB7A2 similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 97.0
  • Bit_score: 170
  • Evalue 9.40e-40
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 97.0
  • Bit_score: 169
  • Evalue 2.20e-39
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 98.0
  • Bit_score: 154
  • Evalue 2.20e-35

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGCTGCGGCGTTACAAGAAAATGCCGATGACCGATCTGCTCAACACGTCGATCAATTCGACGCTGTCGCGCTCGATCATCACCCACGTCACCGTGACCTTGGCGCTGCTTGCGCTGCTGCTGTTCGGCGGCAAGGCGATCCATTCCTTCGCGGCGACCATGACCTTCGGCGTGGTGCTGGTTGGCACCTATACGTCGATCTTCATCGCTGCGCCGATCCTGATCTATCTCGGTGTCGGCGAGAACCGTGGTGGTGAAAACCGTGGCGGCGAGGACAAGCCGTCGAAGCCCGAGGGCAAGTGA
PROTEIN sequence
Length: 101
MLRRYKKMPMTDLLNTSINSTLSRSIITHVTVTLALLALLLFGGKAIHSFAATMTFGVVLVGTYTSIFIAAPILIYLGVGENRGGENRGGEDKPSKPEGK*