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SCNpilot_expt_1000_bf_scaffold_3152_curated_6

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: comp(6103..6579)

Top 3 Functional Annotations

Value Algorithm Source
NAD-dependent formate dehydrogenase gamma subunit n=2 Tax=Bradyrhizobiaceae RepID=F7QJW2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 158.0
  • Bit_score: 301
  • Evalue 5.50e-79
Uncharacterized protein {ECO:0000313|EMBL:EKS31832.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 158.0
  • Bit_score: 301
  • Evalue 7.80e-79
nuoE; NADH dehydrogenase I subunit E; K00127 formate dehydrogenase, gamma subunit similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 158.0
  • Bit_score: 268
  • Evalue 1.60e-69

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGCCGTCAGCATACGAAGCCTGGAGTCCCGAAAGAGGTGCGGAGATCATTGCTGCTCACAGGCAGCTTGAGGGGCCCACCATTGTCATCCTACACGCCGTTCAGGACGCGTTCGGTTATGTGCCGGAGCCGGTGATCCCGATGATCGCCGAGGCGCTTAATCTCTCTCGCGCGGAAGTGCACGGCGTCTTCACATTCTATCACGACTTCCGCCACGAGCCTGCGGGCCGGCATGTGCTCAAGCTCTGCCGTGCTGAGGCTTGTCAGGCTGCGGGCGGTGATGCGCTGGCCGCTCATGCCGAGAAAAAGCTCGGTATTCCGCTCGGGAATACGACGGCGGATGGCCGCGTTACCCTTGAGCCGATCTATTGTCTGGGCCTCTGTGCGACCGCGCCATCGGCGATGCTGGATGGCAAACTGGTCGGGCGCCTCGATACCAAACGTATCGATGCTCTGGTTTCGGAGGCACAGCGATGA
PROTEIN sequence
Length: 159
MPSAYEAWSPERGAEIIAAHRQLEGPTIVILHAVQDAFGYVPEPVIPMIAEALNLSRAEVHGVFTFYHDFRHEPAGRHVLKLCRAEACQAAGGDALAAHAEKKLGIPLGNTTADGRVTLEPIYCLGLCATAPSAMLDGKLVGRLDTKRIDALVSEAQR*