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SCNpilot_expt_1000_bf_scaffold_1355_curated_6

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 3325..3630

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S21 n=1 Tax=Afipia broomeae ATCC 49717 PF62_9BRAD">RepID=K8PF62_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 102.0
  • Bit_score: 188
  • Evalue 2.60e-45
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 102.0
  • Bit_score: 188
  • Evalue 3.60e-45
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 102.0
  • Bit_score: 185
  • Evalue 8.90e-45

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
GTGCAGGTTCTCGTCCGCGATAACAATGTCGACCAGGCTCTCAAGGCGCTGAAGAAGAAGATGCAGCGCGAGGGCATTTTCCGCGAGATGAAGCTCCGCGGTCATTACGAAAAGCCCTCCGAGAAGAAGGCCCGCGAGAAGGCGGAAGCCGTTCGTCGCGCCCGCAAGCTGGCGCGCAAGAAGCTGCAGCGCGAAGGCCTGCTGCCGATGAAGCCGAAGCCGGTGTTCGGCGCTGGCGCTGGCGGCGACCGTGGTGCAGCCGGCGGCCGTGGCCCCGGTGCAGGCGCTCCGCGCACTCCGCGCTAA
PROTEIN sequence
Length: 102
VQVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKAREKAEAVRRARKLARKKLQREGLLPMKPKPVFGAGAGGDRGAAGGRGPGAGAPRTPR*