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SCNpilot_expt_1000_bf_scaffold_448_curated

Search features with annotation key words

Displaying items 31-60 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_448_curated_31
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35222..36259)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKK9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41279.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_448_curated_32
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36425..37153
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V998_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI50736.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein; K07090
SCNpilot_expt_1000_bf_scaffold_448_curated_33
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37260..38108
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NRV7_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28953.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_448_curated_34
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38081..39010)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PID9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41276.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
metallo-beta-lactamase superfamily protein
SCNpilot_expt_1000_bf_scaffold_448_curated_35
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39032..40246)
DNA (1215bp) protein (405aa)
gcdh; glutaryl-CoA dehydrogenase (EC:1.3.99.7); K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7]
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:AEI05881.1}; EC=1.3.8.6 {ECO:0000313|EMBL:AEI05881.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Glutaryl-CoA dehydrogenase n=2 Tax=Oligotropha carboxidovorans RepID=B6JFL2_OLICO
SCNpilot_expt_1000_bf_scaffold_448_curated_36
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40333..41409)
DNA (1077bp) protein (359aa)
ribB; 3,4-dihydroxy-2-butanone-4-phosphate; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II n=2 Tax=Bradyrhizobiaceae RepID=F7QJR4_9BRAD
3,4-dihydroxy-2-butanone-4-phosphate synthase {ECO:0000313|EMBL:EKS32428.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_expt_1000_bf_scaffold_448_curated_37
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41676..42134
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V993_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI50731.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_448_curated_38
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42330..43316
DNA (987bp) protein (329aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
YrdC/Sua5 family protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QJR1_9BRAD
sua5; translation factor protein Sua5; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein
SCNpilot_expt_1000_bf_scaffold_448_curated_39
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43347..44774
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKJ4_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28964.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
glcD2; glycolate oxidase subunit GlcD
SCNpilot_expt_1000_bf_scaffold_448_curated_40
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44815..45597)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F1394E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA05951.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_expt_1000_bf_scaffold_448_curated_41
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45690..46199
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NIR6_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28966.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_448_curated_42
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46210..46632
DNA (423bp) protein (141aa)
Adp-ribose pyrophosphatase n=2 Tax=Oligotropha carboxidovorans RepID=B6JFL9_OLICO
NUDIX hydrolase family protein
NUDIX hydrolase family protein {ECO:0000313|EMBL:AEI05873.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_1000_bf_scaffold_448_curated_43
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46667..47059
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003006756
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05872.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_1000_bf_scaffold_448_curated_44
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47210..47476
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JFM1_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05871.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_1000_bf_scaffold_448_curated_45
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47483..48823)
DNA (1341bp) protein (447aa)
dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3]
Dihydroorotase, multifunctional complex type n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGG0_NITHX
Dihydroorotase {ECO:0000256|SAAS:SAAS00252556}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_1000_bf_scaffold_448_curated_46
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49003..49872
DNA (870bp) protein (290aa)
Folate-binding protein YgfZ n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIC3_9BRAD
Folate-binding protein YgfZ {ECO:0000313|EMBL:EKS41256.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
glycine cleavage T protein (aminomethyl transferase); K06980
SCNpilot_expt_1000_bf_scaffold_448_curated_47
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49869..50507
DNA (639bp) protein (213aa)
DNA-3-methyladenine glycosylase I; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
DNA-3-methyladenine glycosylase I n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NV97_9BRAD
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:ETR76624.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCNpilot_expt_1000_bf_scaffold_448_curated_48
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50504..51115
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKI7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41254.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hydrolase; K06952
SCNpilot_expt_1000_bf_scaffold_448_curated_49
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51210..51722
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V975_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI50713.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_448_curated_50
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51719..52759
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 PF70_9BRAD">RepID=K8PF70_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41252.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_448_curated_51
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52782..53315)
DNA (534bp) protein (178aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JEX1_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05863.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_1000_bf_scaffold_448_curated_52
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53444..54430)
DNA (987bp) protein (329aa)
Alcohol dehydrogenase GroES-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHR6_NITHX
alcohol dehydrogenase GroES-like protein
Alcohol dehydrogenase GroES-like protein {ECO:0000313|EMBL:ABE64231.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_1000_bf_scaffold_448_curated_53
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54755..55867
DNA (1113bp) protein (371aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
nadA; quinolinate synthase A (EC:2.5.1.72); K03517 quinolinate synthase [EC:2.5.1.72]
Quinolinate synthase A n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKK7_AFIFE
SCNpilot_expt_1000_bf_scaffold_448_curated_54
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55982..57580
DNA (1599bp) protein (533aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
L-aspartate oxidase; K00278 L-aspartate oxidase [EC:1.4.3.16]
L-aspartate oxidase n=1 Tax=Afipia broomeae ATCC 49717 PF66_9BRAD">RepID=K8PF66_9BRAD
SCNpilot_expt_1000_bf_scaffold_448_curated_55
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57615..58502
DNA (888bp) protein (296aa)
nicotinate-nucleotide pyrophosphorylase; K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
Nicotinate-nucleotide diphosphorylase (Carboxylating) n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIB4_9BRAD
Nicotinate-nucleotide diphosphorylase (Carboxylating) {ECO:0000313|EMBL:EKS41246.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_1000_bf_scaffold_448_curated_56
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58657..60063)
DNA (1407bp) protein (469aa)
hydrolase n=1 Tax=Afipia birgiae RepID=UPI000302BFEE
Uncharacterized protein {ECO:0000313|EMBL:EKS32888.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
sleB; putative cell wall hydrolase SleB
SCNpilot_expt_1000_bf_scaffold_448_curated_57
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60415..63276)
DNA (2862bp) protein (954aa)
Pyruvate-phosphate dikinase {ECO:0000313|EMBL:EGP08594.1}; EC=2.7.9.1 {ECO:0000313|EMBL:EGP08594.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
ppdK; pyruvate phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1]
pyruvate phosphate dikinase n=1 Tax=Afipia birgiae RepID=UPI0002FDF04C
SCNpilot_expt_1000_bf_scaffold_448_curated_58
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63424..63567)
DNA (144bp) protein (48aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8NUR3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32886.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_448_curated_59
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63788..64141
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JEV2_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05856.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_1000_bf_scaffold_448_curated_60
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64277..65392)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIB0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41241.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
Displaying items 31-60 of 72 in total

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