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SCNpilot_expt_1000_bf_scaffold_850_curated_20

Organism: scnpilot_dereplicated_Afipia_1

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 22364..24859

Top 3 Functional Annotations

Value Algorithm Source
hrpB; ATP-dependent RNA helicase HrpB (EC:3.6.1.-); K03579 ATP-dependent helicase HrpB [EC:3.6.4.13] similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 839.0
  • Bit_score: 1308
  • Evalue 0.0
ATP-dependent helicase HrpB n=1 Tax=Afipia felis ATCC 53690 RepID=K8NK71_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 832.0
  • Bit_score: 1328
  • Evalue 0.0
ATP-dependent helicase HrpB {ECO:0000313|EMBL:EKS30712.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 832.0
  • Bit_score: 1328
  • Evalue 0.0

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2496
ATGATCTTCGACACTTCACTCCCCATCGATGCGGTTCTGGGCGAACTGACGCAGACGCTGGCGCGCGGCAACGCCGCCGTGCTGGTGGCGCCGCCGGGCGCGGGCAAGACCACGCGGGTGCCGCTGGCGCTGCTCGATGCGCCGTGGGCGGAAAATAAGAAGATCATCGTGCTGGAGCCACGCCGCATCGCCGCGCGTGCCGCCGCCGACCGCATGGCGAAGACGCTCAGCGAACGCGCGGGCGAGACCGTTGGCTATCGCGTCCGTTTCGGCTCGAAAGTGTCGCGCAAGACACGGATCGAGGTCGTCACCGAAGGCATTTTCGCGCGGCAGATTCTCGACGATCCGGAACTCACCGGCGTCGCCGCCGTGCTGTTCGACGAATTTCACGAACGCTCGCTCGATGCCGATCTCGGTCTTGCATTGGCGCGCGACGCGCAGCAGGGCTTGCGCGAGGATTTGCGCATTCTGGTGATGTCGGCGACGCTCGACGGCGCGCGGGTGGCGAAGCTGCTCGGCGCTGCGCCGGTGGTGGAAAGCGAGGGCCGCGCTTTTCCGGTGGAGACGCGCTATCTCGGTCGCAAGCCGGACGTACAGGTCGAACGGCAGATGGCCGATGCGATTGCCGCGGCCTTGCGCGCCGACGCCGGTTCGGTGCTGGCGTTTCTGCCGGGCGCCGCCGAAATCCGCCGCACCCAGACCTTTCTGGCCGAGCGCGTCAACGATTCCGCCGTCGAAATCGTGCCGCTGTTCGGCGCGCTCGACGCCGCCGTGCAGGATCGGGCCATCGCGCCGGCGCCGCAGGGCCAGCGCAAGGTGGTGCTGGCGACCTCGATCGCCGAGACCTCACTGACCATCGAGGGCGTGCGTATCGTTGTGGATTCGGGACTCGCACGCGTGCCGCGCTATGAACCGGATATCGGGCTGACACGGCTGGAGACCATCCGCGCTTCGCGTGCAGCGGTGGACCAGCGCCGGGGCCGCGCCGGACGCACCGAACCCGGCGTGTGTTACCGGCTGTGGGACGAGCCGCAGACCGCATCGTTCGAAGCGTTCACGCGGCCGGAGATTCTGTCGGCCGATCTGTCGTCGCTGGTGCTCGATCTCGCCGAATGGGGCGTGACCGATCCATCCACGCTGGCGTTTCTTGACCCGCCGCCCGCGCCGGCGTGGAGCGAGGCTTGTGCGCTGCTGCGCGAACTCGATGCGCTCGATGGTCAGGGCCATATCACCACGGAAGGCAAGAGCCTGCGCGGGCTGGCGCTGCCGCCGCGTCTGGCGCGGATGATCGTCGATGCGGCGAGAGAAGGCGCGGGCGAAGAGGCGGCGCTGATCGCCGCGATCCTCACCGAGCGCGGGCTTGGCGGCGACAGCGTCGATCTCGACGCGCGGCTCGATAATTTCCGCCGCGACCGCGCGTCGCGCGCGCAAGGCGCGCGGCAACTGGCGCAGCGCTGGGCCTCGCAGGTCTTGTCTCCCTCCCCCGTAGGCGGGGAAGGGTTGGGGAGGGGGCAGGCAGGGGATGCGCAGATCTCGACCGGGATGATCCTCGCGCTGGCGTTCCCCGATCGTGTCGCGCGCAATCGCGGCAAGGCCAGCTTCACGCTGGCCAATGGCCGCGGCGCGAGTGTTGAACAAACCTCCGCACTGGCGCGCGAGCCTTATCTCGCGGTGGCCGAACTCACCGGCACCGCGGCGAGCGGACGCATTCTGCTGGCCGCGCCGATCATGCAAAGCGAGATCGAGGCGCGTTTCGCCGACCACATCACCGTGGATGACGAGATCAGCTTCGACAAAGCGGCGATGGCGCTACGGGCGCGGCGGCGCAAGCGGCTGCATGCGCTGATGCTGTCCGAGCAACCGCTGGCGGTGGTGCCGTCGGAGGAGACCGCGCGCGTGCTGGCCGATGGCCTTGCCGGCACGAGCCTCGATCGGCTGCCGTGGTCGAAGGCGCTCAGGCAATGGCGCGACCGGGTGATGTTCCTGCGCACCGCCGCGCCCGACGAATGGCCCGATCTGTCCGACGCTGCGCTAATCGCCGGCCGGCAGGACTGGCTGGCACCGGCACTGCTCGACAAGACCGCGCTGGCGGATGTGTCGGCCGGCGAATTCTCTGACGCGCTGATGGCGCTGGTACCGTGGAGCCATCGCGCGCAACTCGACCGCGAGGCGCCGACGCATTTCGAAGCGCCGACCGGCACCCAGCTTGCGATCGACTACGAGGCCGAGCAGGGGCCGACCATCGCCGTGCGGCTGCAGGAACTGTTCGGGCTGACGGTGCATCCCTCGATCGCGCGCGGAAAGATTCCGCTGGTGCTGGAATTGCTGTCGCCCGCGCATCGCCCGGTGCAGGTCACCCGCGATCTGCCGGGCTTCTGGCGCGGCTCCTATGCCGGCGTCCGCGCCGACCTGCGCGGCCGCTATCCGCGCCATCCCTGGCCGGAGGATCCGGCGAGTGCGCCGCCGACCCGCCGCGTCAAGCCGCGCGGAACCTGA
PROTEIN sequence
Length: 832
MIFDTSLPIDAVLGELTQTLARGNAAVLVAPPGAGKTTRVPLALLDAPWAENKKIIVLEPRRIAARAAADRMAKTLSERAGETVGYRVRFGSKVSRKTRIEVVTEGIFARQILDDPELTGVAAVLFDEFHERSLDADLGLALARDAQQGLREDLRILVMSATLDGARVAKLLGAAPVVESEGRAFPVETRYLGRKPDVQVERQMADAIAAALRADAGSVLAFLPGAAEIRRTQTFLAERVNDSAVEIVPLFGALDAAVQDRAIAPAPQGQRKVVLATSIAETSLTIEGVRIVVDSGLARVPRYEPDIGLTRLETIRASRAAVDQRRGRAGRTEPGVCYRLWDEPQTASFEAFTRPEILSADLSSLVLDLAEWGVTDPSTLAFLDPPPAPAWSEACALLRELDALDGQGHITTEGKSLRGLALPPRLARMIVDAAREGAGEEAALIAAILTERGLGGDSVDLDARLDNFRRDRASRAQGARQLAQRWASQVLSPSPVGGEGLGRGQAGDAQISTGMILALAFPDRVARNRGKASFTLANGRGASVEQTSALAREPYLAVAELTGTAASGRILLAAPIMQSEIEARFADHITVDDEISFDKAAMALRARRRKRLHALMLSEQPLAVVPSEETARVLADGLAGTSLDRLPWSKALRQWRDRVMFLRTAAPDEWPDLSDAALIAGRQDWLAPALLDKTALADVSAGEFSDALMALVPWSHRAQLDREAPTHFEAPTGTQLAIDYEAEQGPTIAVRLQELFGLTVHPSIARGKIPLVLELLSPAHRPVQVTRDLPGFWRGSYAGVRADLRGRYPRHPWPEDPASAPPTRRVKPRGT*