ggKbase home page

SCNpilot_expt_1000_bf_scaffold_850_curated_25

Organism: scnpilot_dereplicated_Afipia_1

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(28935..29975)

Top 3 Functional Annotations

Value Algorithm Source
Hypothetical membrane protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BK15_OLICM similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 343.0
  • Bit_score: 615
  • Evalue 2.90e-173
membrane protein similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 343.0
  • Bit_score: 615
  • Evalue 9.10e-174
Hypothetical membrane protein {ECO:0000313|EMBL:AEI05315.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 343.0
  • Bit_score: 615
  • Evalue 4.10e-173

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
ATGACCACCACCACCGCCTCGGATATTGCCGCGGAACAACCGCGCCCCGTCGTGCGCTTCCGCATCGCGAGCGGCATCTGGCCCGGCCTGTTTTTGACCACCCTGATCGCGGCGGCCGCCTTCGGCATGCAGCGACTGCCGGTGATTTCCACCTTCAGCCCGCTGATCCTGGCGATCCTGCTCGGCATGATCTTCCACAATCTGGTCGGCACGCCGGCCAACGCCAAGCCGGGCGTCACCTTCTCGCTGCGGCGGATCCTGCGCGGCGCGATCATCCTGCTCGGCCTGCAGCTCACCATCACGCAGGTGATCGAAGTCGGCGCGGTCGGCTTCGCCATTATCGTGACCTGTCTGGTTGCGACCTTCCTGTTCACCGGCTGGTTCGGCCGGCTGATCGGCGTCGACCCCAAACTCGCCGAACTGATTGGCGCGGGCACCTCGATCTGCGGTGCGTCCGCCGTGATTGCCACCAACACCGTCACCCGCGCTCCGGACGAAGATGTGGCCTATGCGGTCGCCTGCGTCACGGTATTCGGCTCGATCGCCATGTTCGCCTATCCGACACTCACGCATCTGCTGCATCTCGATCCGCGCGCCTACGGCCTGTGGACCGGCTCCTCGATCCACGAGATCGCGCAGGTGGTTGCCGCCGCGTTCCAGGAAGGCAAGCAGGCCGGCGAGTTCGGCACCATCGCCAAGCTGTCGCGCGTCATGCTGCTGGCGCCGCTGGTGATCTCTCTCGGCGTGATCGCGAGCCGCCGCACCCACGGTACATCGAGCGCCAAGGCACCGCTGCCGTGGTTCGTGTTCGGCTTCATCGCGCTGATCGGCCTCAACAGCATCATCACCGTTCCGCCGGAAGCCAAGACGGTGATCGTCTCGATCACCACCTTCATGCTGTCGATGGCGCTGGCGGCGATGGGTCTCGAAACCGATATCGGCAAGCTCTACGCCAAGGGGCTGCGTCCGTTGATGCTCGGTGCCGCGGCGTCGCTGTTCATCGCTCTGCTCAGCCTGACGCTGATCAAGCTCACCTCCTAG
PROTEIN sequence
Length: 347
MTTTTASDIAAEQPRPVVRFRIASGIWPGLFLTTLIAAAAFGMQRLPVISTFSPLILAILLGMIFHNLVGTPANAKPGVTFSLRRILRGAIILLGLQLTITQVIEVGAVGFAIIVTCLVATFLFTGWFGRLIGVDPKLAELIGAGTSICGASAVIATNTVTRAPDEDVAYAVACVTVFGSIAMFAYPTLTHLLHLDPRAYGLWTGSSIHEIAQVVAAAFQEGKQAGEFGTIAKLSRVMLLAPLVISLGVIASRRTHGTSSAKAPLPWFVFGFIALIGLNSIITVPPEAKTVIVSITTFMLSMALAAMGLETDIGKLYAKGLRPLMLGAAASLFIALLSLTLIKLTS*