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SCNpilot_expt_1000_bf_scaffold_691_curated_26

Organism: scnpilot_dereplicated_Afipia_1

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 21452..22237

Top 3 Functional Annotations

Value Algorithm Source
Rhomboid family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAJ6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 257.0
  • Bit_score: 363
  • Evalue 2.50e-97
Intramembrane serine protease GlpG {ECO:0000313|EMBL:CEG07564.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 256.0
  • Bit_score: 364
  • Evalue 1.60e-97
rhomboid-like protein similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 234.0
  • Bit_score: 327
  • Evalue 3.70e-87

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
GTGCACGCGCCCCAGCCGCCTCGCCGTGAACCGGTCCTGACCATCCCCGGCGCCATGCTGGCGCTGATCGCGATCCTCTGTCTGATTCATGCCGTGCGCATGCTGCTGTTGCCGCCCGAGATCGACGAGGACATCGTGTGGATGTTCGGTTTCGTGCCGGCGCGTTACGACACCACGGTGATGGCCGGTGAATTCCCCGGCGGCTTTCCCGCCAGCATCTGGAGTTTCCTGACCTATTCGCTGCTGCACGCCGACATCACTCATATCGGCTTCAACCTGCTCTGGATGCTGCCGTTCGGCAGCGCCGTGGCGCGCCGCTTCGGTCCGACCCGTTTTTTTGTTTTTCTTGCCGTCTCGGCGGTGGCCGGCGCGCTGGCCCATCTCTTGACCCACCAGCATGAAGTCGCGCCGATGATCGGAGCCTCCGCCGCGGTCTCCGGCGTGATGGCTGCCGCGATCCGGTTCGCCTTTCAGAGCGGCAGCTTCCTGTCGCTCGGCAATGGCGGCGCCGAAGCGGCCGCCCGCGTCCCGGCGCTGCCGCTTTCGAGCGCCTTGCGCAACGGCCGGGTGCTGGCGTTTCTCGCCGTCTGGTTCGGCTTCAACCTGCTGACCGGACTTGGCGCCATCGCCATCGGTACCCAGGTGCAAAGCATCGCCTGGCAGGCCCATATCGGCGGCTTCTGCGCCGGATTGCTGCTGTTCTCGCTGTTCGATCCGATCCCGCCGGCCGGGTTGCGGACGGAGGGCGAGGCCGGTCTCCCTCCCGACGATTCCGAACAGGTCTGA
PROTEIN sequence
Length: 262
VHAPQPPRREPVLTIPGAMLALIAILCLIHAVRMLLLPPEIDEDIVWMFGFVPARYDTTVMAGEFPGGFPASIWSFLTYSLLHADITHIGFNLLWMLPFGSAVARRFGPTRFFVFLAVSAVAGALAHLLTHQHEVAPMIGASAAVSGVMAAAIRFAFQSGSFLSLGNGGAEAAARVPALPLSSALRNGRVLAFLAVWFGFNLLTGLGAIAIGTQVQSIAWQAHIGGFCAGLLLFSLFDPIPPAGLRTEGEAGLPPDDSEQV*