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SCNpilot_expt_1000_bf_scaffold_486_curated_5

Organism: scnpilot_dereplicated_Afipia_1

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 4725..5639

Top 3 Functional Annotations

Value Algorithm Source
Inner-membrane translocator n=1 Tax=Afipia sp. 1NLS2 RepID=D6V253_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 304.0
  • Bit_score: 562
  • Evalue 2.00e-157
LIV-I protein H {ECO:0000313|EMBL:CEG07512.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 304.0
  • Bit_score: 564
  • Evalue 1.20e-157
livH2; ABC transporter, high-affinity branched-chain amino acid transport system permease protein LivH; K01997 branched-chain amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 304.0
  • Bit_score: 559
  • Evalue 6.80e-157

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGGATTATTTCGCGCAGCAATTGATCAACGGCCTCGTGCTCGGCTCGATCTATGGCCTGATCGCCATCGGCTACACCATGGTCTACGGCATCGTCGGCATGATCAATTTCGCCCATGGCGACATCTTCATGATCGGCGGCTTCATCGCGCTGATCTCCTTCCTGATCCTGGTGGCGATGGGCATGACCGCGGTGCCGCTGATCCTGCTGCTGGTGCTGCTGGTCGCGATGGCGACCACGGCGCTTTATGGCTGGACCGTTGAGCGCATCGCCTATCGGCCGCTGCGGCAATCCTTCCGCCTCGCGCCGATGCTGTCGGCGATCGGGATGTCCTTCGTACTGTCGAATTTCGCGCAAGTGGCGCAAGGCGCGCGCGTCAAGCCGGTGCCGCCGATCATCACCGGCGGCTACACGCTGTTCGAGCAAGACGGCTTCGTGGTCCGGCTCTCCAACATCCAGATCATCATCGTCGTCACCACCGTGGTGCTGCTCGCGGTGTTTTCCTGGCTGGTGGCACGCACGCGGCTCGGCCGCGACATGCGCGCCTGCGAGCAGGACCAGACCATGGCGGCGCTGCTCGGCGTCGATGTCGATCGCACCATCTCGATGACTTTCGTGATCGGCGCCGCGCTCGCCGCCGTCGCCGGCATGATGTACCTGCTCTATTACGGCGTGGTCGATTTCTTCATGGGCTTCCTCGCCGGCATCAAGGCCTTCACCGCCGCGGTGCTCGGCGGCATCGGCTCGCTGCCCGGCGCGATGCTCGGCGGCATCGCCATCGGCCTGATCGAGACATTCTGGTCGGCCTACTTCTCAACGGAGTACAAGGACGTCGCCGCCTTCTCGATCCTGATCATCGTGCTGATCTTCCTGCCGACCGGGCTGCTCGGTCGTCCCGAAGTCGAAAAAGTCTGA
PROTEIN sequence
Length: 305
MDYFAQQLINGLVLGSIYGLIAIGYTMVYGIVGMINFAHGDIFMIGGFIALISFLILVAMGMTAVPLILLLVLLVAMATTALYGWTVERIAYRPLRQSFRLAPMLSAIGMSFVLSNFAQVAQGARVKPVPPIITGGYTLFEQDGFVVRLSNIQIIIVVTTVVLLAVFSWLVARTRLGRDMRACEQDQTMAALLGVDVDRTISMTFVIGAALAAVAGMMYLLYYGVVDFFMGFLAGIKAFTAAVLGGIGSLPGAMLGGIAIGLIETFWSAYFSTEYKDVAAFSILIIVLIFLPTGLLGRPEVEKV*