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SCNpilot_expt_1000_bf_scaffold_486_curated_25

Organism: scnpilot_dereplicated_Afipia_1

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 22726..23343

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=2 Tax=Oligotropha carboxidovorans RepID=RS4_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 205.0
  • Bit_score: 397
  • Evalue 7.30e-108
  • rbh
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 205.0
  • Bit_score: 397
  • Evalue 2.30e-108
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 205.0
  • Bit_score: 397
  • Evalue 1.00e-107

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGACTAAGCGCAGTGAGGCGAAGTATAAAATCGATCGCCGTATGGGCCAGAACATCTGGGGCCGCCCGAAGAGCCCCGTCAACAAGCGTGAATACGGCCCGGGCCAGCACGGCCAGCGCCGCAAGGGCAAGCTCTCCGACTTCGGCACGCAGCTCCGCGCCAAGCAGAAGCTCAAGGGCTATTACGCCAACATCTCCGAGCGTCAGTTCTACGCCGTCTACGTCGAGGCGACCCGTCTCAAGGGCGACTCCGGCGAAAATCTGATCGGCCTGCTCGAGCGCCGCCTCGACACGGTGGTCTATCGCGCCAAGTTCGTGCCGACCATGTTCGCCGCGCGCCAGTTCATCAACCACGGCCACGTCAAGGTGAACGGCAAGCGCGTCAACATCGCCAGCTACAAGGTGAAGGTCGGCGACGTCATCGAGGTCAAGGACGCCTCCAAGCAGCTCGCTCTGGTGCTCGAAGCCAACCAGCTCCCCGAGCGCGACACGCCGGACTTCCTCGAAGTCGATCACGGCAAGCAGACCGCGAAGTTCGTCCGCGTGCCGGGCCTGTCGGAAGTGCCGTTCCCGGTGCAGATGGAACCGCACCTGATCATCGAATTCTATTCGCGCTGA
PROTEIN sequence
Length: 206
MTKRSEAKYKIDRRMGQNIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGTQLRAKQKLKGYYANISERQFYAVYVEATRLKGDSGENLIGLLERRLDTVVYRAKFVPTMFAARQFINHGHVKVNGKRVNIASYKVKVGDVIEVKDASKQLALVLEANQLPERDTPDFLEVDHGKQTAKFVRVPGLSEVPFPVQMEPHLIIEFYSR*