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SCNpilot_expt_1000_bf_scaffold_486_curated_29

Organism: scnpilot_dereplicated_Afipia_1

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(26422..27606)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Afipia birgiae RepID=UPI0003619CAB similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 384.0
  • Bit_score: 616
  • Evalue 1.90e-173
Uncharacterized protein {ECO:0000313|EMBL:EKS36223.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 383.0
  • Bit_score: 614
  • Evalue 1.30e-172
low temperature requirement A similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 383.0
  • Bit_score: 570
  • Evalue 3.80e-160

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1185
GTGACGCGCCAGAATGAGAAAGCGCTGTTGCGGGAGCGCGCCCCGCATCAGCATCACCGCGTCACCTATGCCGAGCTGTTCTTCGATCTCGTCTTCGTCTTCGCGATCACCCAGCTTTCCCACACTATGCTGGCCCACTTCACGCCGCTTGGCGTGTTGCAGACCGCGATTTTGTTTTTCGCGGTCTGGTGGGTCTGGATCTACACATCCTGGATCACCAACTGGCTCGATCCGGACCGCACCCCGATCCGGGTGATGCTGTTCGCGCTGATGATCGCGGGCCTCGTGCTCTCGACCTCGATTCCGAAAGCCTTCGACACCCGCGGTCTTGCCTTCGCGCTTGCTTTCGTCGGCATGCAGGTCGGCCGCTCGGTGTTCTCGGCGCTGTCGATCCCGGCCTCGGAGCCGGCGCTGCGGATGAACCTGTGGCGCATCGCGGTGTGGATGACAGGCAGCGGCGTGTTCTGGATCGCCGGCGGCCTGTCCGAAGGCAACATGCGGCCCGTGCTGTGGATCGCCGCATTGCTGATCGAATATGCCGGCCCCGCGATGCGCTTCGCCGTGCCGGGTCTCGGCGCATCCTCGACGCGGGACTGGGACGTCGAAGGCGGCCACATGGCGGAGCGCTGCGCGCTCTTCATCATCATAGCGCTCGGCGAATCCGTCGTGGTCACCGGCGCGACCTTCGCCGAAACCGAGTGGAATACGACCACGATCGCAGCCTTTGTCGTGGCGCTGCTCGGCAGCATCGCGATGTGGTGGGTGTATTTCCACATCGGCGCCGAAGCCGGCTCCGAACAAATCTCGCACGCGAAGGACGCCGGCCGTCTGGCGCGTCTGTCCTACACCTATCTGCATCTGCCGATCGTCGCCGGCATCGTGGTCTCGGCGGTGGGCGATGAACTGTTGCTGGCGCATCCGCAGGGCCATGCCGATGGCAAGGCGGTCATCGGCATGATCGGCGGGCCGCTGCTGTTTCTGATCGGCACCATTCTGTTCAAGCGCAGCATTCGCGGGCATCTGCAATTGTCGCATCTGGTCGGCATCGGACTGTTGCTGTTGCTCATTCCCTTCGCGCAACATCTGTCTCCGCTATCGCTGTCGGCGACGACCACCGCGGTCATGCTGATCGTCGCGGTGTGGGAGGCGATCTCGCTGCGGGGCGAGGCCGCCGCGTCGGCGTAA
PROTEIN sequence
Length: 395
VTRQNEKALLRERAPHQHHRVTYAELFFDLVFVFAITQLSHTMLAHFTPLGVLQTAILFFAVWWVWIYTSWITNWLDPDRTPIRVMLFALMIAGLVLSTSIPKAFDTRGLAFALAFVGMQVGRSVFSALSIPASEPALRMNLWRIAVWMTGSGVFWIAGGLSEGNMRPVLWIAALLIEYAGPAMRFAVPGLGASSTRDWDVEGGHMAERCALFIIIALGESVVVTGATFAETEWNTTTIAAFVVALLGSIAMWWVYFHIGAEAGSEQISHAKDAGRLARLSYTYLHLPIVAGIVVSAVGDELLLAHPQGHADGKAVIGMIGGPLLFLIGTILFKRSIRGHLQLSHLVGIGLLLLLIPFAQHLSPLSLSATTTAVMLIVAVWEAISLRGEAAASA*