ggKbase home page

SCNpilot_expt_1000_bf_scaffold_486_curated_127

Organism: scnpilot_dereplicated_Afipia_1

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 126236..127237

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002FDB788 similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 305.0
  • Bit_score: 285
  • Evalue 6.60e-74
Uncharacterized protein {ECO:0000313|EMBL:EKS36339.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 276.0
  • Bit_score: 274
  • Evalue 2.80e-70
transcriptional regulatory protein AraC family similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 245.0
  • Bit_score: 173
  • Evalue 1.50e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
GTGAAGCTGACGTTTTCGACCGATCATCTCCGTCCGCATGAGCGCTTCGATTATTGGCGCGAAGTACGCGCGCGCAATCTGTTCGGCGTCACCGCGTCGTTGCGGCAGGAAGAGAGGCTTCAGTTCCATGGCCATTTTTCGGCCAGCGTCCTGGGTGGCGCAATCCTCAGCGAGATGCGGGCCTCCTCCTACAGCGTCGCCCGCACCGCCGCCGACATTTCCCTGAACGCGAGCGACAGCCTGTGCCTCTATCAACAGGCTGGCGGCTCAAGCTGGTTCGACACGGGAGCGGGCGAATTCCTGGTGCCCGCCGGCGGTCTGGCCATCAGTCATTCGGACCTGCCCTATCGCACCCGGCCGGTCACGGCGCACGGATTCGATCTGCGCGTCCTCAAGATTCCGCTCGCCGGGCGCGACACGCTCGCCGGTCATGCACGCGGCCTGTCACCATCGCTGCCGCGCAACGATCCGCGTTTGCACGCCGCCGTTTCCGCAGCCTTCAACGCGCTGGTTGCCGATGCCGCAACGAAGCCCGACGCGGATTTTGACCATGCCGTGCGCCATCTGGCCCAACTGGCCCTGCTCGCGCGCGGCCGCGTACCAGCGGGCCTGCCGGAAAGCCGCGCGGCGATGCGCTTCGGGTTNNNNNNNNNNNNNNNNNGCAGCACACGCATTCTCCATTTCGCTGCGCCAGGTCCATCTTTTGTTCGAACCCACCGGCGTCAGCTTTGCCCGCACCCTGACGGCGATGCGGCTCGAAGAGGCGCAGCGGCGCCTGAAACTCATGCCGTCCGAACCGGTTTCTCATATCGCCTATGCCTGCGGCTTCGACAGCCTCGCGACTTTCTATCGGGCATTTCGCGCCACCTACGGCACGACGCCAGGCGATATGCGGATGTCCAGTCGCCCCATGTGACAGTGCCTCCGGCCCTATTGTGCCGGACCTGCTGTACCTCGCTTGACAGAACGCGGCGTCAATCCATGTGCGTTTGCGCTGGATGA
PROTEIN sequence
Length: 334
VKLTFSTDHLRPHERFDYWREVRARNLFGVTASLRQEERLQFHGHFSASVLGGAILSEMRASSYSVARTAADISLNASDSLCLYQQAGGSSWFDTGAGEFLVPAGGLAISHSDLPYRTRPVTAHGFDLRVLKIPLAGRDTLAGHARGLSPSLPRNDPRLHAAVSAAFNALVADAATKPDADFDHAVRHLAQLALLARGRVPAGLPESRAAMRFGXXXXXXXSTRILHFAAPGPSFVRTHRRQLCPHPDGDAARRGAAAPETHAVRTGFSYRLCLRLRQPRDFLSGISRHLRHDARRYADVQSPHVTVPPALLCRTCCTSLDRTRRQSMCVCAG*