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SCNpilot_expt_1000_bf_scaffold_448_curated_9

Organism: scnpilot_dereplicated_Afipia_1

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 9903..11816

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 640.0
  • Bit_score: 1124
  • Evalue 0.0
dxs1; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7); K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 628.0
  • Bit_score: 1087
  • Evalue 0.0
1-deoxy-D-xylulose-5-phosphate synthase n=2 Tax=Bradyrhizobiaceae RepID=F7QJV3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 640.0
  • Bit_score: 1124
  • Evalue 0.0

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1914
GTGTCCTCAGCCAGCCCGACGCCTTTGCTCGATACACTCGACACGCCCGACAAGCTGCGCCGGCTGAAACCCGAGCAGCTTCGCCAGGTCGCCGACGAGCTGCGCCAAGAGACCATCTCGGCCGTCTCGGTCACCGGCGGCCATCTCGGTGCCGGCCTTGGCGTGGTCGAACTGACCACGGCGCTGCATTACGTTTTCAACACGCCGGACGACCGCATCATCTGGGATGTCGGCCATCAGGCCTATCCGCATAAGATTCTCACCGGCCGGCGCGACCGCATCCGCACCCTGCGCCAGGGCGGCGGCCTGTCCGGCTTCACCAAGCGCGCCGAGAGCGAGTACGACCCGTTCGGCACCGCGCACTCCTCGACCTCGATCTCCGCCGGCCTCGGCATGGCAGTGGGCCGCGACCTGCTCGGCCGGAAGAACAACGTCATCGCGGTGATCGGCGATGGCTCGATGTCCGCCGGCATGGCCTATGAGGCGATGAATAATGCCGGCGCGCTGAATTCGCGCCTGATCGTCATCCTCAACGACAACGACATGTCGATCGCCCCGCCGGTCGGCGCGATGTCGGCCTATCTCGCGCGCCTGCTGTCGAGCCAGACCTACGGCTCCGCCCGCGAGATCCTGAAAAACCTCGCCCACCGCATGCCGAAATTCTTCGAGGATCGCGCGCTGCGCGCCGAGGAATACGCCCGGGGTATGGTGACCGGCGGCGCATTGTTCGAGGAACTCGGCCTGTTCTATGTCGGACCGATCGACGGTCACAACCTCGATCACCTGCTGCCGGTGCTGACCAATGTGCGCGACAACGGCAACGGGCCGGTGCTGATCCATGTCGTCACCAAGAAGGGCAAGGGTTACGCCCCGGCCGAGGAAGCCGACGACAAGTATCATGGCGTGGTGAAGTTCGACGTCGTCACCGGCAAGCAGATGAAGGCAAAGTCCAATGCACCGTCCTACACCGCGGTGTTCGGCCAGAGCCTGGTCAAGGAAGCGCAAAAGGACGACAAGATCGTCGCCATCACCGCGGCGATGCCCGGCGGCACCGGCATCGACATCTTCGCCAAGGCGTTTCCCGAGCGCACCTTCGATGTCGGCATCGCCGAGCAGCATGCGGTGACCTTCGCCGCCGGCCTCGCCACCGAAGGCTTCAAGCCGTTCTGCGCGCTGTACTCGACCTTCCTGCAGCGCGGCTACGATCAGGTGATCCACGATGTCGCGATCCAGCGCCTGCCGGTGCGTTTCGCCATCGACCGCGCCGGACTTGTCGGCGCCGACGGCCCCACTCATGCCGGCGCATTCGACAATGCCTATCTCGGCTGCCTGCCCGGCATGATCATCATGGCCGCCGCCGACGAAGCCGATCTCGTGCACATGGTGGCGACGCAGGTCGCGATCAACGACGCGCCGAGCGCGCTGCGCTATCCGCGCGGCGAAGGCCGCGGCGTCGATATGCCGGAGGTCGGCGTGCCGCTGCCGATCGGCAAGGGCCGCATCATGCGCGAAGGCGCCAAGGTCGCGCTGCTGTCGTTCGGCACCCGTCTTGGCGAGTGCCTCAAGGCGGCGGACGATCTCGCCGCGCAGGGCATCAATCCGACGATCGCCGATGCGCGCTTCATGAAACCGCTCGATGTCGAGATGGTGCTCAAGCTGGCGCGCGAGCACGAGGTGCTCATCACCATCGAGGAAGGTTCGATCGGCGGTTTCGGCACCCACGTGATCCAGACGCTGGCCGATCACGGCATGCTCGATCGCGGCCTCAAGGTGCGCGCCATGGTGCTGCCCGACACCTTCATCGATCAGGACACGCCGGCGAAGATGTACGAACAGGCCGGGCTCGACGCCAAGGGCATCGCCGCCAAGGTGTTCGAGGTGCTGGGCTCCAGCCCGACGGTGAAGTCGGCCTGA
PROTEIN sequence
Length: 638
VSSASPTPLLDTLDTPDKLRRLKPEQLRQVADELRQETISAVSVTGGHLGAGLGVVELTTALHYVFNTPDDRIIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKRAESEYDPFGTAHSSTSISAGLGMAVGRDLLGRKNNVIAVIGDGSMSAGMAYEAMNNAGALNSRLIVILNDNDMSIAPPVGAMSAYLARLLSSQTYGSAREILKNLAHRMPKFFEDRALRAEEYARGMVTGGALFEELGLFYVGPIDGHNLDHLLPVLTNVRDNGNGPVLIHVVTKKGKGYAPAEEADDKYHGVVKFDVVTGKQMKAKSNAPSYTAVFGQSLVKEAQKDDKIVAITAAMPGGTGIDIFAKAFPERTFDVGIAEQHAVTFAAGLATEGFKPFCALYSTFLQRGYDQVIHDVAIQRLPVRFAIDRAGLVGADGPTHAGAFDNAYLGCLPGMIIMAAADEADLVHMVATQVAINDAPSALRYPRGEGRGVDMPEVGVPLPIGKGRIMREGAKVALLSFGTRLGECLKAADDLAAQGINPTIADARFMKPLDVEMVLKLAREHEVLITIEEGSIGGFGTHVIQTLADHGMLDRGLKVRAMVLPDTFIDQDTPAKMYEQAGLDAKGIAAKVFEVLGSSPTVKSA*