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SCNpilot_expt_1000_bf_scaffold_448_curated_11

Organism: scnpilot_dereplicated_Afipia_1

near complete RP 53 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 12811..14052

Top 3 Functional Annotations

Value Algorithm Source
RNA methyltransferase (EC:2.1.1.-); K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 411.0
  • Bit_score: 620
  • Evalue 3.40e-175
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PP83_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 413.0
  • Bit_score: 693
  • Evalue 1.00e-196
Uncharacterized protein {ECO:0000313|EMBL:EKS41305.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 413.0
  • Bit_score: 693
  • Evalue 1.40e-196

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1242
ATGACCGAACGCCTCGTCATCGATCATGTCGGCCATTTCGGCGACGGCGTCGCGCTGGAGCACGGCGGCAACATCTATGTGCCCTACACCCTGCCCGGCGAGACCGTGGACGTGCTGCCGGTGCCCGGCCAGCATCCCGACCGCCGCACGCTGGCGCACATCGTCACGCCGAGTCCGGAGCGCATCGAGCCGTTCTGCCCGCATTTCGGCACCTGCGGCGGCTGCGCCATCCAGCACTGGCAGCCCGATGCCTATCGCGCGTGGAAACGGCAATTGGTGATCGACACGCTGGCGCAGGCCGGCATCGATTGCGAGGTCGACGAGCTGGTCGACGCTCATGGCAACGGACGGCGGCGCATGGTGCTGCATGCGCGGCTTTCCGCGCAGAAGGTGCTACGCGTCGGCTTCGCCGCCGCCGGACGGCACGAGATCATCGCCATCGACCACTGCCCGATTCTCGATCCGGCGCTCTCCGGCGCATTCGCCGCCGCCAACGACATCGCCGAAGCCTTGGTGCCGGCCGCCAAGCCGCTCGACATCCAGATCACCGCGACCGAACGCGGCCTCGACATCGACGTGCGCGGCTCGGGACCGCTGAACACCGCCCTGCTCTCCAGGCTGTCGCGGCTTGCCGAGCATCACAATCTCGCGCGGCTGACCCGGCACGGCGAACTCGTGATCATGCGCGCACCGCCGCTGGTGCGGATCGGCAAGGCTCGGGTGACGCTGCCGCCCGGCGCGTTCATGCAGCCCACTGCCGCAGGCGAGGAAACCCTCGCCGCGCTCGCGATCGAGCGCTGCAAGGGCGCCAAGCGCGTCGCCGATCTGTTCTGCGGCATCGGGCCGTTCGCGCTGCGTCTTGCGGAAAAATTCAGGGTCGCGGCGTTCGACAGCGACGCACCGGCAATCACGGCGCTCCGCAACGCGGTCAATACGACGCAAGGGCTGAAGCCGATCACCGCGGAGGCGCGCGACCTGTTCCGCCGTCCGCTGGTGCCGCAGGAATTGCGCGATTACGACTGCGTGGTGTTCGATCCGCCGCGCCAGGGCGCGCAGGCGCAGTCGCAGCAGCTTGCCGCCAGCAGGATCGCGCAGGTCGTCGCGGTGTCGTGCAATCCGGCGACCTTCGCACGCGACGCCCGCATCCTGATCGACGGCGGCTTCAGGATCGAGCACATCACACCGGTCGATCAGTTCCGCCACACCCCGCATGTCGAACTGGTGGCGCGGTTCCGGCGCTAG
PROTEIN sequence
Length: 414
MTERLVIDHVGHFGDGVALEHGGNIYVPYTLPGETVDVLPVPGQHPDRRTLAHIVTPSPERIEPFCPHFGTCGGCAIQHWQPDAYRAWKRQLVIDTLAQAGIDCEVDELVDAHGNGRRRMVLHARLSAQKVLRVGFAAAGRHEIIAIDHCPILDPALSGAFAAANDIAEALVPAAKPLDIQITATERGLDIDVRGSGPLNTALLSRLSRLAEHHNLARLTRHGELVIMRAPPLVRIGKARVTLPPGAFMQPTAAGEETLAALAIERCKGAKRVADLFCGIGPFALRLAEKFRVAAFDSDAPAITALRNAVNTTQGLKPITAEARDLFRRPLVPQELRDYDCVVFDPPRQGAQAQSQQLAASRIAQVVAVSCNPATFARDARILIDGGFRIEHITPVDQFRHTPHVELVARFRR*